RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 CNOT4O95628 575 aaKnown RBP10.14□□□□□ -0.79
CLIP1-209ENST00000537178 ADAP00813 363 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 AMY2AP04746 511 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 JUPP14923 745 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 PROZP22891 400 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 LRIT3Q3SXY7 679 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 RAET1LQ5VY80 246 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 FAM198BQ6UWH4 519 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 ASRGL1Q7L266 308 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 MAMDC2Q7Z304 686 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-209ENST00000537178 GRASPQ7Z6J2 395 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-209ENST00000537178 GPR149Q86SP6 731 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 GCDHQ92947 438 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-209ENST00000537178 FKBP10Q96AY3 582 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 NELL2Q99435 816 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 C11orf49Q9H6J7 331 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 MAGIXQ9H6Y5 334 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 AIG1Q9NVV5 245 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 ARPC4-TTLL3A0A0A6YYG9 625 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 CD8B2A6NJW9 211 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 C12orf71A8MTZ7 269 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 POLR1CO15160 346 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-209ENST00000537178 GPR37L1O60883 481 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 CD8BP10966 210 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 RELL1Q8IUW5 271 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 GLIS1Q8NBF1 620 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 PXYLP1Q8TE99 480 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 CNOT9Q92600 299 aaKnown RBP10.14□□□□□ -0.79
CLIP1-209ENST00000537178 MALSU1Q96EH3 234 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 CDC6Q99741 560 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 FAIMQ9NVQ4 179 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 KLHL9Q9P2J3 617 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 RBPJLQ9UBG7 517 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 PSAT1Q9Y617 370 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 CENPBD1B2RD01 187 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 PEX10O60683 326 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 UBE2NP61088 152 aaKnown RBP10.14□□□□□ -0.79
CLIP1-209ENST00000537178 OGDHQ02218 1023 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 CARD17Q5XLA6 110 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 MINDY1Q8N5J2 469 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 PQLC3Q8N755 202 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 PPP1R35Q8TAP8 253 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 SPRYD4Q8WW59 207 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-209ENST00000537178 PPIL3Q9H2H8 161 aaKnown RBP10.14□□□□□ -0.79
CLIP1-209ENST00000537178 IL21RQ9HBE5 538 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 TP53TG5Q9Y2B4 290 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 RNF215Q9Y6U7 377 aa10.14□□□□□ -0.79
CLIP1-209ENST00000537178 RFPL2O75678 378 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 MTNR1AP48039 350 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 SLC11A1P49279 550 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 RPS15AP62244 130 aaKnown RBP10.13□□□□□ -0.79
CLIP1-209ENST00000537178 TECRLQ5HYJ1 363 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF767PQ75MW2 155 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 WDR20Q8TBZ3 569 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 TRMT10AQ8TBZ6 339 aaKnown RBP10.13□□□□□ -0.79
CLIP1-209ENST00000537178 TCTEX1D2Q8WW35 142 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 CHFRQ96EP1 664 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 ZNF559Q9BR84 538 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 C2orf42Q9NWW7 574 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-209ENST00000537178 BOLA2-SMG1P6H3BVE0 249 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 DUX1O43812 170 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 EEDO75530 441 aaKnown RBP10.13□□□□□ -0.79
CLIP1-209ENST00000537178 TMEM225BP0DP42 221 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 PORP16435 677 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-209ENST00000537178 MSX1P28360 303 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 DLSTP36957 453 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 RCAN2Q14206 197 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 HACD2Q6Y1H2 254 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 OSTM1Q86WC4 334 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 OR5T1Q8NG75 326 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 SCAMP4Q969E2 229 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 ARL11Q969Q4 196 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 MYRFLQ96LU7 910 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 BIRC8Q96P09 236 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 TGM7Q96PF1 710 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 OR14A2Q96R54 314 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 BIN3Q9NQY0 253 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 POLE4Q9NR33 117 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 SUSD2Q9UGT4 822 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 IGKV6D-41A0A0C4DH26 115 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 A6NCN8 305 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 JRKO75564 520 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 CDC123O75794 336 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-209ENST00000537178 SC5DO75845 299 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 THEGLP0DJG4 465 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 CD1DP15813 335 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 RFC2P35250 354 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 PTH2RP49190 550 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 RING1Q06587 406 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 TCEAL1Q15170 157 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 PPP1R3AQ16821 1122 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 DPY19L3Q6ZPD9 716 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 CFAP77Q6ZQR2 320 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 GALNT10Q86SR1 603 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 PLD6Q8N2A8 252 aaKnown RBP10.13□□□□□ -0.79
CLIP1-209ENST00000537178 METTL27Q8N6F8 245 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-209ENST00000537178 CSNK1A1LQ8N752 337 aa10.13□□□□□ -0.79
CLIP1-209ENST00000537178 BOLLQ8N9W6 283 aaKnown RBP10.13□□□□□ -0.79
CLIP1-209ENST00000537178 OR51D1Q8NGF3 324 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms