RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 CSPG4Q6UVK1 2322 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 A0A0G2JNG1 304 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 CXorf51AA0A1B0GTR3 108 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 A0A1B0GVL5 298 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 TRIM49BA6NDI0 452 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 PMS2P5A8MQ11 134 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 A8MX80 341 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 ANKRD66B4E2M5 251 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 INPP4BO15327 924 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 ZW10O43264 779 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 LRRTM2O43300 516 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 BUB1O43683 1085 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 DPM1O60762 260 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 LRCH4O75427 683 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 CEACAM4O75871 244 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 OR2C1O95371 312 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 SCGB1D1O95968 90 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 IGSF6O95976 241 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 HIST1H2ABP04908 130 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 PFKFB1P16118 471 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 HIST1H2ADP20671 130 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 GARSP41250 739 aaKnown RBP4.86□□□□□ -1.63
CLIP1-207ENST00000536634 ACTR1BP42025 376 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 RGRP47804 291 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 CTSCP53634 463 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 ACTR1AP61163 376 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 RHOAP61586 193 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 DCAF7P61962 342 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 CDK3Q00526 305 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 GCNT1Q02742 428 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 RAPSNQ13702 412 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 KIR2DS5Q14953 304 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 CYTH1Q15438 398 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 PCGF3Q3KNV8 242 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 KRTAP27-1Q3LI81 207 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 WDR38Q5JTN6 314 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 PNCKQ6P2M8 343 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 FAM199XQ6PEV8 388 aaPredicted RBP4.86□□□□□ -1.63
CLIP1-207ENST00000536634 DOK6Q6PKX4 331 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 SARM1Q6SZW1 724 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 SPNS3Q6ZMD2 512 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 HIST3H2AQ7L7L0 130 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 BNIPLQ7Z465 357 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 PHLDB2Q86SQ0 1253 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 FAM131BQ86XD5 332 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 SFRP1Q8N474 314 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 C1orf52Q8N6N3 182 aaKnown RBP4.86□□□□□ -1.63
CLIP1-207ENST00000536634 ZNF397Q8NF99 534 aaPredicted RBP4.86□□□□□ -1.63
CLIP1-207ENST00000536634 OR10G6Q8NH81 332 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 GSDMBQ8TAX9 411 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 HDAC2Q92769 488 aaKnown RBP4.86□□□□□ -1.63
CLIP1-207ENST00000536634 PGAP3Q96FM1 320 aaPredicted RBP4.86□□□□□ -1.63
CLIP1-207ENST00000536634 C17orf77Q96MU5 243 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 OR6C1Q96RD1 312 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 BARD1Q99728 777 aaKnown RBP4.86□□□□□ -1.63
CLIP1-207ENST00000536634 SLX1AQ9BQ83 275 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 TBC1D10AQ9BXI6 508 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 LHX9Q9NQ69 397 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.86□□□□□ -1.63
CLIP1-207ENST00000536634 OGFRQ9NZT2 677 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 LNPEPQ9UIQ6 1025 aa4.86□□□□□ -1.63
CLIP1-207ENST00000536634 MN1Q10571 1320 aaPredicted RBP4.86□□□□□ -1.63
CLIP1-207ENST00000536634 HRNRQ86YZ3 2850 aaPredicted RBP4.86□□□□□ -1.63
CLIP1-207ENST00000536634 ABCA4P78363 2273 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 A0A1W2PPI3 338 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 A6NL46 340 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 C21orf140B9A014 251 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 J3QR06 171 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 E2F3O00716 465 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 MED7O43513 233 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 KDELR3O43731 214 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 SPAG6O75602 509 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 PDE9AO76083 593 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 SOD1P00441 154 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 ANKRD34CP0C6C1 535 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 GABRB1P18505 474 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 PTPN4P29074 926 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 ARL3P36405 182 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 CAMPP49913 170 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 SUOXP51687 545 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 NDST2P52849 883 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 GEMIN4P57678 1058 aaKnown RBP4.85□□□□□ -1.63
CLIP1-207ENST00000536634 RAD51Q06609 339 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 UBE2V1Q13404 147 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 MAMLD1Q13495 774 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 KIR2DS3Q14952 304 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 SLC25A52Q3SY17 297 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 SLC35E4Q6ICL7 350 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 ADAM5Q6NVV9 412 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 RWDD4Q6NW29 188 aaKnown RBP4.85□□□□□ -1.63
CLIP1-207ENST00000536634 IQCKQ8N0W5 287 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 OR10V1Q8NGI7 309 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 PPP4R1Q8TF05 950 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 C9orf72Q96LT7 481 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 CFAP57Q96MR6 1250 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 ZNF396Q96N95 335 aaPredicted RBP4.85□□□□□ -1.63
CLIP1-207ENST00000536634 NCAPGQ9BPX3 1015 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 SEMA6AQ9H2E6 1030 aa4.85□□□□□ -1.63
CLIP1-207ENST00000536634 PHPT1Q9NRX4 125 aaPredicted RBP4.85□□□□□ -1.63
CLIP1-207ENST00000536634 ZNF69Q9UC07 566 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms