RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 TREX2Q9BQ50 279 aaPredicted RBP13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 OSBPL11Q9BXB4 747 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 UBQLN3Q9H347 655 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 TNFRSF12AQ9NP84 129 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 SLC35C2Q9NQQ7 365 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 ITGB1BP2Q9UKP3 347 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 GRID1Q9ULK0 1009 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 MAPRE3Q9UPY8 281 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 CAMK2AQ9UQM7 478 aa13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 POLR3HQ9Y535 204 aaPredicted RBP13.06□□□□□ -0.32
RTN3P1-201ENST00000536295 DCHS2Q6V1P9 2916 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 KDM4EB2RXH2 506 aaPredicted RBP13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 ICOSLGO75144 302 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 BCAS2O75934 225 aaPredicted RBP13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 CPA3P15088 417 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 KRT4P19013 534 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 PTPN6P29350 595 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 CRHR1P34998 444 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 PTGDSP41222 190 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 CORO7P57737 925 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 ZNF763Q0D2J5 394 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 RIPPLY2Q5TAB7 128 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 SLC30A6Q6NXT4 461 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 GALNT18Q6P9A2 607 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 SEM1Q6ZVN7 128 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 YRDCQ86U90 279 aaKnown RBP13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 DMRTC2Q8IXT2 367 aaPredicted RBP13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 SAMD14Q8IZD0 417 aaPredicted RBP13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 FAM9CQ8IZT9 166 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 FAM83FQ8NEG4 500 aaPredicted RBP13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 OR7G2Q8NG99 324 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 C11orf24Q96F05 449 aaPredicted RBP13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 COL21A1Q96P44 957 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 MCCC2Q9HCC0 563 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 MIEF1Q9NQG6 463 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 GPR55Q9Y2T6 319 aaPredicted RBP13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 EXPH5Q8NEV8 1989 aa13.05□□□□□ -0.32
RTN3P1-201ENST00000536295 TLDC2A0PJX2 215 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 SERTM1A2A2V5 107 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 PRAMEF25A6NGN4 478 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 AHRRA9YTQ3 701 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 FAM47E-STBD1D6RA91 191 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 SNPHO15079 494 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 TO15178 435 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 CDH16O75309 829 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 ERN1O75460 977 aaKnown RBP13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 JUNP05412 331 aaKnown RBP13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 BMP7P18075 431 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 DDCP20711 480 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 MPIP34949 423 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 KRT20P35900 424 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 GSTM5P46439 218 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 NCBP2P52298 156 aaKnown RBP eCLIP13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 DNAJB13P59910 316 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 PRSS53Q2L4Q9 553 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 ACSF3Q4G176 576 aaPredicted RBP13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 DCST1Q5T197 706 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 CLEC6AQ6EIG7 209 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 TDRPQ86YL5 185 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 CLYBLQ8N0X4 340 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 TNIP2Q8NFZ5 429 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 RDH11Q8TC12 318 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 TMCO6Q96DC7 493 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 BTBD9Q96Q07 612 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 ADOQ96SZ5 270 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 UGT2B28Q9BY64 529 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 PPCSQ9HAB8 311 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 FOLH1BQ9HBA9 442 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 SERHLQ9NQF3 203 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 RRAGDQ9NQL2 400 aaPredicted RBP13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 OXSMQ9NWU1 459 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 SIRT5Q9NXA8 310 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 FIS1Q9Y3D6 152 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 PCDHGB3Q9Y5G1 929 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 HCFC1P51610 2035 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 CSMD2Q7Z408 3487 aa13.04□□□□□ -0.32
RTN3P1-201ENST00000536295 PDZD2O15018 2839 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 HSPB2A8KAH6 182 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 CT45A8P0DMV1 189 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 CT45A9P0DMV2 189 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 BMP5P22003 454 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 IL12BP29460 328 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 MC3RP41968 323 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 NAA20P61599 178 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 ZNF155Q12901 538 aaPredicted RBP13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 MYBPHQ13203 477 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 SNTA1Q13424 505 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 SNTB1Q13884 538 aaKnown RBP13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 HSPB2Q16082 182 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 SLC25A35Q3KQZ1 300 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 CT45A2Q5DJT8 189 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 SH2D4BQ5SQS7 431 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 LIPMQ5VYY2 423 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 VASNQ6EMK4 673 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 FAM71E1Q6IPT2 247 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 NPSR1Q6W5P4 371 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 LARP4Q71RC2 724 aaKnown RBP eCLIP13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 TRIM46Q7Z4K8 759 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 C10orf107Q8IVU9 208 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 SLC44A2Q8IWA5 706 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms