RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 HLA-DPB1P04440 258 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 TIMP2P16035 220 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 NTSP30990 170 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 PPP3R1P63098 170 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.45□□□□□ -1.38
RAG1-203ENST00000534663 TMEM107Q6UX40 140 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 SLC36A4Q6YBV0 504 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 SLC9B2Q86UD5 537 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 TMC8Q8IU68 726 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 TRAM1L1Q8N609 369 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 AMER3Q8N944 861 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 BBS1Q8NFJ9 593 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 LRRC20Q8TCA0 184 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 AKAP1Q92667 903 aaKnown RBP eCLIP6.45□□□□□ -1.38
RAG1-203ENST00000534663 UBE2E3Q969T4 207 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 TCEAL4Q96EI5 215 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 MAP6Q96JE9 813 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 ZCCHC2Q9C0B9 1178 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 DDX31Q9H8H2 851 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 MYNNQ9NPC7 610 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 B3GAT2Q9NPZ5 323 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 EIF3KQ9UBQ5 218 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 ADAM30Q9UKF2 790 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 TRAPPC4Q9Y296 219 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 IRAK3Q9Y616 596 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 SCN8AQ9UQD0 1980 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 IGLV3-16A0A075B6K0 115 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 TSPAN4O14817 238 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 AKAP8O43823 692 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 DHFRP00374 187 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 HMGN2P05204 90 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 CD3GP09693 182 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 ZNF30P17039 623 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 NOS3P29474 1203 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 OPRD1P41143 372 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 GZMKP49863 264 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 ZNF81P51508 661 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 CLDN2P57739 230 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 STXBP1P61764 594 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 SNRPGP62308 76 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 BNC1Q01954 994 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 RPA4Q13156 261 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 FCN2Q15485 313 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 PLK5Q496M5 336 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 YIF1BQ5BJH7 314 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 TPGS2Q68CL5 300 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 FAM92BQ6ZTR7 304 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 SYT9Q86SS6 491 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 NRMQ8IXM6 262 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 IZUMO1Q8IYV9 350 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 RAD51AP1Q96B01 352 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 ZG16BQ96DA0 208 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 PDXPQ96GD0 296 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 C12orf66Q96MD2 445 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 LYSMD1Q96S90 227 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 SLC25A19Q9HC21 320 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 TM7SF3Q9NS93 570 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 TDP1Q9NUW8 608 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 TAS2R7Q9NYW3 318 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 TNFRSF10DQ9UBN6 386 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 IL36AQ9UHA7 158 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 SLC23A1Q9UHI7 598 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 TEX46H3BTG2 121 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 GABRPO00591 440 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 NRG2O14511 850 aaPredicted RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 ERI3O43414 337 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 PCDH8O95206 1070 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 DDCP20711 480 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 SLC6A11P48066 632 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 KCNJ5P48544 419 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 PCBP3P57721 371 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 SREBF2Q12772 1141 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 ADAM15Q13444 863 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 CAMK1Q14012 370 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 GLYR1Q49A26 553 aaPredicted RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 KHDRBS2Q5VWX1 349 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 PLBD1Q6P4A8 553 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 LIPIQ6XZB0 460 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 VRK2Q86Y07 508 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 CPOQ8IVL8 374 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 KLHL36Q8N4N3 616 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 OR8K5Q8NH50 307 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 ZNF671Q8TAW3 534 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 CD99L2Q8TCZ2 262 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 OR5P2Q8WZ92 322 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 CXorf40BQ96DE9 158 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 RIPOR3Q96MK2 946 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 MKRN2Q9H000 416 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 CLEC4MQ9H2X3 399 aaPredicted RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 RHBGQ9H310 441 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 KLHL42Q9P2K6 505 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 DIMT1Q9UNQ2 313 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 PRELID1Q9Y255 219 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 HS3ST2Q9Y278 367 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 LSM2Q9Y333 95 aaKnown RBP6.45□□□□□ -1.38
RAG1-203ENST00000534663 BACE2Q9Y5Z0 518 aa6.45□□□□□ -1.38
RAG1-203ENST00000534663 PLXNA4Q9HCM2 1894 aa6.44□□□□□ -1.38
RAG1-203ENST00000534663 SEC16AO15027 2179 aa6.44□□□□□ -1.38
RAG1-203ENST00000534663 USP34Q70CQ2 3546 aa6.44□□□□□ -1.38
RAG1-203ENST00000534663 TRBV23OR9-2A0A075B6M9 112 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms