RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 HCFC1P51610 2035 aa12.87□□□□□ -0.35
SF3B2-215ENST00000534307 FRG2CA6NGY1 282 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 ESPNB1AK53 854 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 PLOD3O60568 738 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 WDR1O75083 606 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 CT45A8P0DMV1 189 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 CT45A9P0DMV2 189 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 GLI4P10075 376 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 UROSP10746 265 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 PRPH2P23942 346 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 PTGDSP41222 190 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 DCAF7P61962 342 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 BTKQ06187 659 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 KIAA0040Q15053 153 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 CT45A2Q5DJT8 189 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 TMEM198Q66K66 360 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 FAM71E1Q6IPT2 247 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 ZNF585AQ6P3V2 769 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 RNF165Q6ZSG1 346 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 ACAD11Q709F0 780 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 NUP54Q7Z3B4 507 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 TRABD2AQ86V40 505 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 C10orf107Q8IVU9 208 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 RIBC1Q8N443 379 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-215ENST00000534307 BANPQ8N9N5 519 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 AENQ8WTP8 325 aaKnown RBP12.86□□□□□ -0.35
SF3B2-215ENST00000534307 ASB5Q8WWX0 329 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 KAT2AQ92830 837 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 METTL2AQ96IZ6 378 aaKnown RBP12.86□□□□□ -0.35
SF3B2-215ENST00000534307 JSRP1Q96MG2 331 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-215ENST00000534307 VSTM2LQ96N03 204 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 SPOCK3Q9BQ16 436 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 GATA5Q9BWX5 397 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-215ENST00000534307 LDAHQ9H6V9 325 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 RUBCNLQ9H714 662 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 MYNNQ9NPC7 610 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 NPDC1Q9NQX5 325 aaPredicted RBP12.86□□□□□ -0.35
SF3B2-215ENST00000534307 LGALS13Q9UHV8 139 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 C15orf41Q9Y2V0 281 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 PCDHGB3Q9Y5G1 929 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 PTGDR2Q9Y5Y4 395 aa12.86□□□□□ -0.35
SF3B2-215ENST00000534307 MYO1GB0I1T2 1018 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 UGT2B11O75310 529 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 NME6O75414 186 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-215ENST00000534307 BCAS2O75934 225 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-215ENST00000534307 HPNP05981 417 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 SNRPB2P08579 225 aaKnown RBP12.85□□□□□ -0.35
SF3B2-215ENST00000534307 GDF1P27539 372 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 PTPN6P29350 595 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 CDK9P50750 372 aaKnown RBP12.85□□□□□ -0.35
SF3B2-215ENST00000534307 RPP38P78345 283 aaKnown RBP12.85□□□□□ -0.35
SF3B2-215ENST00000534307 IMPG1Q17R60 797 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 SPDYAQ5MJ70 313 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 WLSQ5T9L3 541 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 TIGD3Q6B0B8 471 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 CLEC6AQ6EIG7 209 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 NOXRED1Q6NXP6 359 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 NPSR1Q6W5P4 371 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 B3GNT6Q6ZMB0 384 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 PACS2Q86VP3 889 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 CCDC71Q8IV32 467 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-215ENST00000534307 CCDC63Q8NA47 563 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 OR7G2Q8NG99 324 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 RNF138Q8WVD3 245 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 APOPT1Q96IL0 206 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 GNRHR2Q96P88 292 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 NODALQ96S42 347 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 TRMOQ9BU70 441 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 TUBB1Q9H4B7 451 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 RRAGDQ9NQL2 400 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-215ENST00000534307 ACAD8Q9UKU7 415 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 POLR3HQ9Y535 204 aaPredicted RBP12.85□□□□□ -0.35
SF3B2-215ENST00000534307 ACANP16112 2415 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 ARHGAP21Q5T5U3 1957 aa12.85□□□□□ -0.35
SF3B2-215ENST00000534307 TLDC2A0PJX2 215 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 OR6C70A6NIJ9 312 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 TRIM13O60858 407 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 TOXO94900 526 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 PSMG1O95456 288 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 HOXD4P09016 255 aaPredicted RBP12.84□□□□□ -0.35
SF3B2-215ENST00000534307 TACR1P25103 407 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 MPIP34949 423 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 ADH7P40394 386 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 TRPC1P48995 793 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 CORO7P57737 925 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 CRYZQ08257 329 aaKnown RBP12.84□□□□□ -0.35
SF3B2-215ENST00000534307 C2orf80Q0P641 193 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 PLCXD2Q0VAA5 305 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 SNTA1Q13424 505 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 NHSL2Q5HYW2 709 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 C1orf185Q5T7R7 199 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 WDR93Q6P2C0 686 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 SEM1Q6ZVN7 128 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 IKBIPQ70UQ0 350 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 ULK2Q8IYT8 1036 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 FAM9CQ8IZT9 166 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 OR2T11Q8NH01 316 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 TMBIM1Q969X1 311 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 SLC35A4Q96G79 324 aa12.84□□□□□ -0.35
SF3B2-215ENST00000534307 FCRL1Q96LA6 429 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms