RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CHEK1O14757 476 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 CFLARO15519 480 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 TYROBPO43914 113 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 RTN2O75298 545 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 STAM2O75886 525 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 DUSP14O95147 198 aaKnown RBP1.87□□□□□ -2.11
BRCA2-205ENST00000533776 APBB3O95704 486 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 SERPINF2P08697 491 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 HIST1H2AGP0C0S8 130 aaPredicted RBP1.87□□□□□ -2.11
BRCA2-205ENST00000533776 AREGP15514 252 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 ACP1P24666 158 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 MAT2AP31153 395 aaKnown RBP1.87□□□□□ -2.11
BRCA2-205ENST00000533776 KRT83P78385 493 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 PRKCEQ02156 737 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 ZNF85Q03923 595 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 ASAH1Q13510 395 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 SERTAD2Q14140 314 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 MORF4L2Q15014 288 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 CD226Q15762 336 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 ZKSCAN8Q15776 578 aaPredicted RBP1.87□□□□□ -2.11
BRCA2-205ENST00000533776 SHROOM1Q2M3G4 852 aaPredicted RBP1.87□□□□□ -2.11
BRCA2-205ENST00000533776 QRICH1Q2TAL8 776 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 PAN3Q58A45 887 aaKnown RBP1.87□□□□□ -2.11
BRCA2-205ENST00000533776 CMPK2Q5EBM0 449 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 HIST2H2AA3Q6FI13 130 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 ZNF410Q86VK4 478 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.87□□□□□ -2.11
BRCA2-205ENST00000533776 OR4F17Q8NGA8 305 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 P3H4Q92791 437 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 HIST1H2ACQ93077 130 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 LHX4Q969G2 390 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 C9orf85Q96MD7 179 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 DEFB118Q96PH6 123 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 OR4F4Q96R69 305 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 HES7Q9BYE0 225 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 TSPY26PQ9H489 355 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 KCNMB3Q9NPA1 279 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 MIEF1Q9NQG6 463 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 ARGLU1Q9NWB6 273 aaPredicted RBP1.87□□□□□ -2.11
BRCA2-205ENST00000533776 ZNF175Q9Y473 711 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 RNF115Q9Y4L5 304 aa1.87□□□□□ -2.11
BRCA2-205ENST00000533776 MACROD2A1Z1Q3 448 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 MFSD2BA6NFX1 497 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 EPOPA6NHQ4 379 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 TCP11X1B4DZS4 312 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 C11orf98E9PRG8 122 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 LCMT2O60294 686 aaKnown RBP1.86□□□□□ -2.11
BRCA2-205ENST00000533776 GOSR1O95249 250 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 SYNGR4O95473 234 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 SLC2A10O95528 541 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 ECDO95905 644 aaPredicted RBP1.86□□□□□ -2.11
BRCA2-205ENST00000533776 GSTA1P08263 222 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 GHRP10912 638 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 ZNF18P17022 549 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 PTPN4P29074 926 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 CASP3P42574 277 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 NPY2RP49146 381 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 POU3F4P49335 361 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 CNN1P51911 297 aaKnown RBP1.86□□□□□ -2.11
BRCA2-205ENST00000533776 WNT4P56705 351 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 CCZ1BP86790 482 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 CCZ1P86791 482 aaPredicted RBP1.86□□□□□ -2.11
BRCA2-205ENST00000533776 GFPT1Q06210 699 aaPredicted RBP1.86□□□□□ -2.11
BRCA2-205ENST00000533776 CD47Q08722 323 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 BTG3Q14201 252 aaPredicted RBP1.86□□□□□ -2.11
BRCA2-205ENST00000533776 ZIC1Q15915 447 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 ATRAIDQ6UW56 229 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 TSEN54Q7Z6J9 526 aaKnown RBP1.86□□□□□ -2.11
BRCA2-205ENST00000533776 ZNF677Q86XU0 584 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 PSMA8Q8TAA3 256 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 CCDC26Q8TAB7 109 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 TMEM37Q8WXS4 190 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 KRT35Q92764 455 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 FRAT1Q92837 279 aaPredicted RBP1.86□□□□□ -2.11
BRCA2-205ENST00000533776 SNX21Q969T3 373 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 FAM104AQ969W3 186 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 FAF2Q96CS3 445 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 ZNF560Q96MR9 790 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 TRPV6Q9H1D0 765 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 HPS4Q9NQG7 708 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 KLRF1Q9NZS2 232 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 SLC2A6Q9UGQ3 507 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 SYNJ2O15056 1496 aa1.86□□□□□ -2.11
BRCA2-205ENST00000533776 NPC1L1Q9UHC9 1359 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 NPIPA5A0A0B4J1W7 369 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 FAM170AA1A519 330 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 ZFP92A6NM28 416 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 NPIPA5E9PKD4 350 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 PANO1I0J062 215 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 KINO60870 393 aaKnown RBP1.85□□□□□ -2.11
BRCA2-205ENST00000533776 SDC3O75056 442 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 LRP3O75074 770 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 CXCL14O95715 111 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 ACTL6AO96019 429 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 APRTP07741 180 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 HOXB7P09629 217 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 MDKP21741 143 aaPredicted RBP1.85□□□□□ -2.11
BRCA2-205ENST00000533776 MARCKSP29966 332 aaPredicted RBP1.85□□□□□ -2.11
BRCA2-205ENST00000533776 XCR1P46094 333 aa1.85□□□□□ -2.11
BRCA2-205ENST00000533776 OR1D4P47884 311 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms