RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 ARHGAP39Q9C0H5 1083 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 GSTO2Q9H4Y5 243 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 SOX17Q9H6I2 414 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 MGAT4CQ9UBM8 478 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 NUP188Q5SRE5 1749 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 ARFGEF2Q9Y6D5 1785 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 TTLL8A6PVC2 850 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 C1orf196B1AJZ1 125 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 FANCGO15287 622 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 HRGP04196 525 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 ZDHHC11BP0C7U3 371 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 ZNF14P17017 642 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 C5AR1P21730 350 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 DCTP40126 519 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 CRYZQ08257 329 aaKnown RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 LRIT3Q3SXY7 679 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 ALG10BQ5I7T1 473 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 HACD4Q5VWC8 232 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 TMEM107Q6UX40 140 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 DPPA2Q7Z7J5 298 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 BPHLQ86WA6 291 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 TMEM173Q86WV6 379 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 SYNPOQ8N3V7 929 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 LNX2Q8N448 690 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 OR8S1Q8NH09 359 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 ADAMTS19Q8TE59 1207 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 GPR62Q9BZJ7 368 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 GORASP2Q9H8Y8 452 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 UNKLQ9H9P5 680 aaKnown RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 KCNK13Q9HB14 408 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 NANSQ9NR45 359 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 C14orf119Q9NWQ9 140 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 GFOD1Q9NXC2 390 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 KLHL9Q9P2J3 617 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 PRAF2O60831 178 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 RNGTTO60942 597 aaKnown RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 IFNA5P01569 189 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 CAPN3P20807 821 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 MLLT10P55197 1068 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 ELOAQ14241 798 aaKnown RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 RAB11BQ15907 218 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 COL28A1Q2UY09 1125 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 RAB41Q5JT25 222 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 SLC18B1Q6NT16 456 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 SPATC1Q76KD6 591 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 MAMDC2Q7Z304 686 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 HOXB13Q92826 284 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 SH3YL1Q96HL8 342 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 AP1S3Q96PC3 154 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 DPH2Q9BQC3 489 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 CACNG6Q9BXT2 260 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 PTGDR2Q9Y5Y4 395 aa6.67□□□□□ -1.34
CTNND1-236ENST00000533667 DNMT3AQ9Y6K1 912 aaPredicted RBP6.67□□□□□ -1.34
CTNND1-236ENST00000533667 ATP6V1G2-DDX39BF2Z307 99 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 ATG12O94817 140 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 MBP02144 154 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 HOXB9P17482 250 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-236ENST00000533667 SYN1P17600 705 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 TYRP1P17643 537 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 FBLP22087 321 aaKnown RBP6.66□□□□□ -1.34
CTNND1-236ENST00000533667 HOXD11P31277 338 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-236ENST00000533667 CD68P34810 354 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-236ENST00000533667 STK19P49842 368 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-236ENST00000533667 WNT4P56705 351 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 PRPS1P60891 318 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 NKX3-2P78367 333 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 ID2Q02363 134 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 PIGFQ07326 219 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 HYAL2Q12891 473 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 RAB33AQ14088 237 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 GALEQ14376 348 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 ODF4Q2M2E3 257 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 DEFB134Q4QY38 66 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 TCTE1Q5JU00 501 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 SHFQ7M4L6 423 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 COMMD6Q7Z4G1 85 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 BEST3Q8N1M1 668 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 VWA5B2Q8N398 1253 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 SLC5A8Q8N695 610 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 ABHD11Q8NFV4 315 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 ZNF597Q96LX8 424 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 C7orf50Q9BRJ6 194 aaKnown RBP6.66□□□□□ -1.34
CTNND1-236ENST00000533667 PINK1Q9BXM7 581 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 TUBB1Q9H4B7 451 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 DCAF16Q9NXF7 216 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 VNN3Q9NY84 501 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 B4GALT7Q9UBV7 327 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 SH3BGRL2Q9UJC5 107 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 SCML1Q9UN30 329 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 LOC100509620A0A075B734 347 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 DUX1O43812 170 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 TRAPPC6AO75865 159 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 DIRAS3O95661 229 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 PAK4O96013 591 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-236ENST00000533667 ADORA3P0DMS8 318 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 ITGAMP11215 1152 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 C6P13671 934 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 ETFAP13804 333 aa6.66□□□□□ -1.34
CTNND1-236ENST00000533667 HOXA11P31270 313 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-236ENST00000533667 NAA10P41227 235 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms