RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 TAPBPLQ9BX59 468 aa11.75□□□□□ -0.53
RAD50-209ENST00000533482 CD207Q9UJ71 328 aa11.75□□□□□ -0.53
RAD50-209ENST00000533482 CARD8Q9Y2G2 431 aa11.75□□□□□ -0.53
RAD50-209ENST00000533482 CMAHPQ9Y471 501 aa11.75□□□□□ -0.53
RAD50-209ENST00000533482 SPAG17Q6Q759 2223 aa11.75□□□□□ -0.53
RAD50-209ENST00000533482 A0A1W2PRG6 482 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 ANXA2P2A6NMY6 339 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 ANXA2P07355 339 aaKnown RBP11.74□□□□□ -0.53
RAD50-209ENST00000533482 PSMA3P25788 255 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 GNALP38405 381 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 PPP5CP53041 499 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 PLBD1Q6P4A8 553 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 SAMD12Q8N8I0 201 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 MOSPD2Q8NHP6 518 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 FANK1Q8TC84 345 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 ERMAPQ96PL5 475 aaPredicted RBP11.74□□□□□ -0.53
RAD50-209ENST00000533482 AMBRA1Q9C0C7 1298 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 SMURF1Q9HCE7 757 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 MBNL1Q9NR56 388 aaKnown RBP11.74□□□□□ -0.53
RAD50-209ENST00000533482 CNOT1A5YKK6 2376 aaKnown RBP11.74□□□□□ -0.53
RAD50-209ENST00000533482 PLD2O14939 933 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 KIAA0355O15063 1070 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 HCRTR2O43614 444 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 SCO2O43819 266 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 RDH16O75452 317 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 CSTAP01040 98 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 ZNF45Q02386 682 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 KEAP1Q14145 624 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 ERV3-1Q14264 604 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 DECR1Q16698 335 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 LRIT3Q3SXY7 679 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 FAM109BQ6ICB4 259 aaPredicted RBP11.74□□□□□ -0.53
RAD50-209ENST00000533482 MMP21Q8N119 569 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 PRR14Q9BWN1 585 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 PDE7BQ9NP56 450 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 TEX10Q9NXF1 929 aaPredicted RBP11.74□□□□□ -0.53
RAD50-209ENST00000533482 SERTAD3Q9UJW9 196 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 DNAJC13O75165 2243 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 C11orf98E9PRG8 122 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 H0YIV9 168 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 TMX2-CTNND1H3BSU7 103 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 GKN3PP0CG01 181 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 GRPRP30550 384 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 SSTR4P31391 388 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 EIF1AXP47813 144 aaKnown RBP11.74□□□□□ -0.53
RAD50-209ENST00000533482 RPA4Q13156 261 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 ZNF77Q15935 545 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 MEDAGQ5VYS4 303 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 B3GLCTQ6Y288 498 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 ANKRD13BQ86YJ7 626 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 ZBTB8BQ8NAP8 495 aaPredicted RBP11.74□□□□□ -0.53
RAD50-209ENST00000533482 NECTIN4Q96NY8 510 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 FAIMQ9NVQ4 179 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 LIPT1Q9Y234 373 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 TRAV6A0A075B6T7 132 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 FAM183AA6NL82 134 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 SGK494L7N484 410 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 JRKO75564 520 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 PORP16435 677 aaPredicted RBP11.74□□□□□ -0.53
RAD50-209ENST00000533482 NPPBP16860 134 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 HOXC8P31273 242 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 ALDH3B2P48448 385 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 RPTNQ6XPR3 784 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 SPRED2Q7Z698 418 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 OR8J2Q8NGG1 315 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 THEM6Q8WUY1 208 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 PPP1R14BQ96C90 147 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 CNDP2Q96KP4 475 aaKnown RBP11.74□□□□□ -0.53
RAD50-209ENST00000533482 ADAD1Q96M93 576 aaKnown RBP11.74□□□□□ -0.53
RAD50-209ENST00000533482 ZFYVE21Q9BQ24 234 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 TMEM184CQ9NVA4 438 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 LYARQ9NX58 379 aaKnown RBP11.74□□□□□ -0.53
RAD50-209ENST00000533482 IL37Q9NZH6 218 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 ITGB1BP2Q9UKP3 347 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 IFT52Q9Y366 437 aa11.74□□□□□ -0.53
RAD50-209ENST00000533482 QSER1Q2KHR3 1735 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 PRSS38A1L453 326 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 H3BNC9 293 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 CTDSP2O14595 271 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 PRDX1Q06830 199 aaKnown RBP11.73□□□□□ -0.53
RAD50-209ENST00000533482 CRYZQ08257 329 aaKnown RBP11.73□□□□□ -0.53
RAD50-209ENST00000533482 GAB1Q13480 694 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 MINDY2Q8NBR6 621 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 ZDHHC1Q8WTX9 485 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 GGHQ92820 318 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 CCDC115Q96NT0 180 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 TREX2Q9BQ50 279 aaPredicted RBP11.73□□□□□ -0.53
RAD50-209ENST00000533482 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.73□□□□□ -0.53
RAD50-209ENST00000533482 PRRG4Q9BZD6 226 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 TRIM2Q9C040 744 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 MYNNQ9NPC7 610 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 EXTL2Q9UBQ6 330 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 ARID1AO14497 2285 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 TRBV4-1A0A0J9YWV2 114 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 COQ9O75208 318 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 RPS15AP62244 130 aaKnown RBP11.73□□□□□ -0.53
RAD50-209ENST00000533482 IHHQ14623 411 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 PUM1Q14671 1186 aaKnown RBP eCLIP11.73□□□□□ -0.531e-6■□□□□ 8.1
RAD50-209ENST00000533482 TMEM35AQ53FP2 167 aa11.73□□□□□ -0.53
RAD50-209ENST00000533482 SLC29A4Q7RTT9 530 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms