RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 PRR20CP86479 221 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 PRR20DP86480 221 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 PRR20BP86481 221 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 PRR20AP86496 221 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 GTF3C1Q12789 2109 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 DUSP8Q13202 625 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 UBAP2LQ14157 1087 aaKnown RBP10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 ZNHIT3Q15649 155 aaPredicted RBP10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 PGS1Q32NB8 556 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 ZNF791Q3KP31 576 aaPredicted RBP10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 SPDYE7PQ495Y7 208 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 ZNF385BQ569K4 471 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 TTMPQ5BVD1 217 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 RNFT1Q5M7Z0 435 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 CPTPQ5TA50 214 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 C1QL3Q5VWW1 255 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 ZNF324BQ6AW86 544 aaPredicted RBP10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 NXNQ6DKJ4 435 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 FJX1Q86VR8 437 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 SLC22A16Q86VW1 577 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 SLC44A2Q8IWA5 706 aaPredicted RBP10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 FBXW8Q8N3Y1 598 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 KRTCAP2Q8N6L1 136 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 ZNF441Q8N8Z8 693 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 OR7A2PQ8NGA2 310 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 ADIPOR1Q96A54 375 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 CTHRC1Q96CG8 243 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 ERP27Q96DN0 273 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 OMA1Q96E52 524 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 ZBED6CLQ96FA7 236 aaPredicted RBP10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 CHMP6Q96FZ7 201 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 FCRL1Q96LA6 429 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 GPR137Q96N19 417 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 PRPF18Q99633 342 aaKnown RBP10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 DOHHQ9BU89 302 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 TTTY12Q9BZ98 90 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 DEFB127Q9H1M4 99 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 ACBD3Q9H3P7 528 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 GLIPR2Q9H4G4 154 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 METTL7AQ9H8H3 244 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 FOLH1BQ9HBA9 442 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 ATAD3AQ9NVI7 634 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 THAP1Q9NVV9 213 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 NOP53Q9NZM5 478 aaKnown RBP10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 BOKQ9UMX3 212 aaPredicted RBP10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 EXO1Q9UQ84 846 aaKnown RBP10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 SNX8Q9Y5X2 465 aa10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.56□□□□□ -0.72
UBASH3B-208ENST00000533451 SPTAN1Q13813 2472 aaKnown RBP10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 GOLGA8QA0A0J9YX86 632 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 GOLGA8OA6NCC3 632 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 FRG2CA6NGY1 282 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 TRPC5OSA6NMA1 111 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 GOLGA8NF8WBI6 632 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 CFLARO15519 480 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 ZNHIT1O43257 154 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 LRRTM2O43300 516 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 ASNA1O43681 348 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 PLOD3O60568 738 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 PPM1BO75688 479 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 SLITRK5O94991 958 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 ABCB1P08183 1280 aaPredicted RBP10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 G6PDP11413 515 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 IL12BP29460 328 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 EMDP50402 254 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 PRKAG1P54619 331 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 PER3P56645 1201 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 DCAF7P61962 342 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 TOMM20Q15388 145 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 KRTCAP3Q53RY4 240 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 BICRALQ6AI39 1079 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 WDR53Q7Z5U6 358 aaPredicted RBP10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 RETREG3Q86VR2 466 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 SLC34A3Q8N130 599 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 GHDCQ8N2G8 530 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 ZFP62Q8NB50 900 aaPredicted RBP10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 C17orf47Q8NEP4 570 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 FBXO30Q8TB52 745 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 LRRC8CQ8TDW0 803 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 JADE3Q92613 823 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 TMBIM1Q969X1 311 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 HSPBAP1Q96EW2 488 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 ZNF597Q96LX8 424 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 LDAHQ9H6V9 325 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 AKTIPQ9H8T0 292 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 TUBA8Q9NY65 449 aaPredicted RBP10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 TAS2R7Q9NYW3 318 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 KLRF1Q9NZS2 232 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 CNIH4Q9P003 139 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 B4GALT7Q9UBV7 327 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 ZNF639Q9UID6 485 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 SLC5A6Q9Y289 635 aa10.55□□□□□ -0.72
UBASH3B-208ENST00000533451 NUP214P35658 2090 aaPredicted RBP10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 FREM3P0C091 2139 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 USP9XQ93008 2570 aaPredicted RBP10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 HMGB1P1B2RPK0 211 aaPredicted RBP10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 ACOX3O15254 700 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 SLC19A2O60779 497 aa10.54□□□□□ -0.72
UBASH3B-208ENST00000533451 WISP2O76076 250 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms