RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 EXOSC8Q96B26 276 aaKnown RBP15.31■□□□□ 0.04
PKP3-209ENST00000533069 HSPBAP1Q96EW2 488 aa15.31■□□□□ 0.04
PKP3-209ENST00000533069 PHF12Q96QT6 1004 aa15.31■□□□□ 0.04
PKP3-209ENST00000533069 DOHHQ9BU89 302 aa15.31■□□□□ 0.04
PKP3-209ENST00000533069 NXF5Q9H1B4 397 aaKnown RBP15.31■□□□□ 0.04
PKP3-209ENST00000533069 TP63Q9H3D4 680 aaPredicted RBP15.31■□□□□ 0.04
PKP3-209ENST00000533069 MYNNQ9NPC7 610 aa15.31■□□□□ 0.04
PKP3-209ENST00000533069 MIEF1Q9NQG6 463 aa15.31■□□□□ 0.04
PKP3-209ENST00000533069 QPCTLQ9NXS2 382 aa15.31■□□□□ 0.04
PKP3-209ENST00000533069 B4GALT7Q9UBV7 327 aa15.31■□□□□ 0.04
PKP3-209ENST00000533069 ZDHHC2Q9UIJ5 367 aa15.31■□□□□ 0.04
PKP3-209ENST00000533069 USH1CQ9Y6N9 552 aa15.31■□□□□ 0.04
PKP3-209ENST00000533069 SVILO95425 2214 aa15.31■□□□□ 0.04
PKP3-209ENST00000533069 A0A1B0GVC2 190 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 NDUFAB1O14561 156 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 SNX3O60493 162 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 PDE9AO76083 593 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 SLITRK5O94991 958 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 SNX4O95219 450 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 ABCD3P28288 659 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 MPIP34949 423 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 DCTP40126 519 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 MAGEA5P43359 124 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 PSPHP78330 225 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 MRPS35P82673 323 aaKnown RBP15.3■□□□□ 0.04
PKP3-209ENST00000533069 ADORA2A-AS1P86434 159 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 DUSP8Q13202 625 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 EXOSC7Q15024 291 aaKnown RBP15.3■□□□□ 0.04
PKP3-209ENST00000533069 LTB4RQ15722 352 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 TRMT12Q53H54 448 aaKnown RBP15.3■□□□□ 0.04
PKP3-209ENST00000533069 NOXRED1Q6NXP6 359 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 FAM180BQ6P0A1 224 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 TMEM64Q6YI46 380 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 PIGWQ7Z7B1 504 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 CCDC116Q8IYX3 515 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 FAM9CQ8IZT9 166 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 ANKS4BQ8N8V4 417 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 OR5M3Q8NGP4 307 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 CDC26Q8NHZ8 85 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.3■□□□□ 0.04
PKP3-209ENST00000533069 SPPL2AQ8TCT8 520 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 BCAS4Q8TDM0 211 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 DIO2Q92813 273 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 LCORQ96JN0 433 aaPredicted RBP15.3■□□□□ 0.04
PKP3-209ENST00000533069 ZNF597Q96LX8 424 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 DMRTA2Q96SC8 542 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 ITPAQ9BY32 194 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 ZNF703Q9H7S9 590 aaPredicted RBP15.3■□□□□ 0.04
PKP3-209ENST00000533069 TAS2R7Q9NYW3 318 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 DTX4Q9Y2E6 619 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 ICE1Q9Y2F5 2266 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 CCL27Q9Y4X3 112 aa15.3■□□□□ 0.04
PKP3-209ENST00000533069 POLR3HQ9Y535 204 aaPredicted RBP15.3■□□□□ 0.04
PKP3-209ENST00000533069 FRG2CA6NGY1 282 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 PRSS44E7EML9 344 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 AQP7O14520 342 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 ADAM10O14672 748 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 BCKDKO14874 412 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 ZNHIT1O43257 154 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 SUSD5O60279 629 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 HCN1O60741 890 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 SEC22BO75396 215 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 PPM1BO75688 479 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 DRD5P21918 477 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 COL8A1P27658 744 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 SOX18P35713 384 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 PPICP45877 212 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 EMDP50402 254 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 FBXW4P57775 412 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 C2orf80Q0P641 193 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 SLC10A1Q14973 349 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 FAM71E1Q6IPT2 247 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 ACAD11Q709F0 780 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 TRILQ7L0X0 811 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 TICAM1Q8IUC6 712 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 OR9A2Q8NGT5 310 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 BBS4Q96RK4 519 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 FAM107BQ9H098 131 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 MEAF6Q9HAF1 191 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 LRTM1Q9HBL6 345 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 PROK2Q9HC23 129 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 NPHS2Q9NP85 383 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 PNPOQ9NVS9 261 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 C1orf109Q9NX04 203 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 DNAJC15Q9Y5T4 150 aa15.29■□□□□ 0.04
PKP3-209ENST00000533069 ZGRF1Q86YA3 2104 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 CROCCQ5TZA2 2017 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 ATP6AP2A0A1C7CYW4 349 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 LRRC3CA6NJW4 275 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 MYO1GB0I1T2 1018 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 TO15178 435 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 PLOD3O60568 738 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 TRIM3O75382 744 aaPredicted RBP15.28■□□□□ 0.04
PKP3-209ENST00000533069 ATP6AP2O75787 350 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 KITP10721 976 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 MAN2A2P49641 1150 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 ARFIP2P53365 341 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 PLCXD2Q0VAA5 305 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 KIAA0040Q15053 153 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 NNATQ16517 81 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms