RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 SLC35G4P0C7Q5 338 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 GPR89BP0CG08 455 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 ADORA3P0DMS8 318 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 PSMA5P28066 241 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 AXLP30530 894 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 OTX2P32243 289 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 RPL9P32969 192 aaKnown RBP2.45□□□□□ -2.02
CD44-234ENST00000531873 PRPHP41219 470 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 PTGER3P43115 390 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 POU3F4P49335 361 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 UBE2HP62256 183 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 FKBP3Q00688 224 aaKnown RBP2.45□□□□□ -2.02
CD44-234ENST00000531873 CNTN2Q02246 1040 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 SRYQ05066 204 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 IL24Q13007 206 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 GPM6BQ13491 265 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 LY6DQ14210 128 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 EMC2Q15006 297 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 ZNF146Q15072 292 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 PDK4Q16654 411 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 MTHFSDQ2M296 383 aaKnown RBP2.45□□□□□ -2.02
CD44-234ENST00000531873 SHROOM1Q2M3G4 852 aaPredicted RBP2.45□□□□□ -2.02
CD44-234ENST00000531873 ZNF311Q5JNZ3 666 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 MUC21Q5SSG8 566 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 SEL1L2Q5TEA6 688 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 WASH2PQ6VEQ5 465 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 HACD2Q6Y1H2 254 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 NET1Q7Z628 596 aaPredicted RBP2.45□□□□□ -2.02
CD44-234ENST00000531873 TMEM110Q86TL2 294 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 ZNF781Q8N8C0 355 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 Q8NBF4 154 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 PRSS33Q8NF86 280 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 OR1B1Q8NGR6 318 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 NANPQ8TBE9 248 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 GIPC3Q8TF64 312 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 DLX4Q92988 240 aaPredicted RBP2.45□□□□□ -2.02
CD44-234ENST00000531873 PINX1Q96BK5 328 aaKnown RBP2.45□□□□□ -2.02
CD44-234ENST00000531873 RAB3CQ96E17 227 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 HPDLQ96IR7 371 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 TSPAN18Q96SJ8 248 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 LGMNQ99538 433 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 RPP25Q9BUL9 199 aaKnown RBP2.45□□□□□ -2.02
CD44-234ENST00000531873 CCDC28BQ9BUN5 200 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 ADGRL4Q9HBW9 690 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 SCRT2Q9NQ03 307 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 FAM114A2Q9NRY5 505 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 SMPD3Q9NY59 655 aaPredicted RBP2.45□□□□□ -2.02
CD44-234ENST00000531873 TAS2R16Q9NYV7 291 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 THYN1Q9P016 225 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 EIF3KQ9UBQ5 218 aaKnown RBP2.45□□□□□ -2.02
CD44-234ENST00000531873 CHMP2BQ9UQN3 213 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 FBXO7Q9Y3I1 522 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 MAB21L2Q9Y586 359 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 FKBP7Q9Y680 259 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 HCFC1P51610 2035 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 PCNX3Q9H6A9 2034 aa2.45□□□□□ -2.02
CD44-234ENST00000531873 SALL1Q9NSC2 1324 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 TRGV8A0A0C4DH27 118 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 TRIM64CA6NLI5 447 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 K7EQM0 130 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 PDLIM1O00151 329 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 CXCL11O14625 94 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 TFECO14948 347 aaPredicted RBP2.44□□□□□ -2.02
CD44-234ENST00000531873 MCF2LO15068 1137 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 RIPK2O43353 540 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 EFNA2O43921 213 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 GMFGO60234 142 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 GPRIN2O60269 458 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 ZG16O60844 167 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 SORBS2O94875 1100 aaKnown RBP2.44□□□□□ -2.02
CD44-234ENST00000531873 HCKP08631 526 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 CPN1P15169 458 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 RPA2P15927 270 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 ATP6V1C1P21283 382 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 GLRA2P23416 452 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 SAA4P35542 130 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 NAPAP54920 295 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 VCPP55072 806 aaKnown RBP2.44□□□□□ -2.02
CD44-234ENST00000531873 NDUFV3P56181 108 aaKnown RBP2.44□□□□□ -2.02
CD44-234ENST00000531873 TMEM50BP56557 158 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 SRPXP78539 464 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 FASTKD3Q14CZ7 662 aaKnown RBP2.44□□□□□ -2.02
CD44-234ENST00000531873 NECTIN1Q15223 517 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 SIX1Q15475 284 aaPredicted RBP2.44□□□□□ -2.02
CD44-234ENST00000531873 CD226Q15762 336 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 CAMK4Q16566 473 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 CCDC57Q2TAC2 916 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 CCDC152Q4G0S7 254 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 RABGAP1LQ5R372 815 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 LINC00242Q5T6M2 205 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 ATAD3BQ5T9A4 648 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 CENPPQ6IPU0 288 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 PYHIN1Q6K0P9 492 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 TMEM184AQ6ZMB5 413 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 RPAINQ86UA6 219 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 LUZP1Q86V48 1076 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 VPS36Q86VN1 386 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 LCA5Q86VQ0 697 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 FAM131BQ86XD5 332 aa2.44□□□□□ -2.02
CD44-234ENST00000531873 CENPSQ8N2Z9 138 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms