RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 MBD2Q9UBB5 411 aa2.73□□□□□ -1.97
BRCA2-203ENST00000528762 EIF3KQ9UBQ5 218 aaKnown RBP2.73□□□□□ -1.97
BRCA2-203ENST00000528762 IKZF3Q9UKT9 509 aa2.73□□□□□ -1.97
BRCA2-203ENST00000528762 A0A087X002 238 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 IGHV3-20A0A0C4DH32 117 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 ESYT2A0FGR8 921 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 FBLL1A6NHQ2 334 aaKnown RBP2.72□□□□□ -1.97
BRCA2-203ENST00000528762 ZNF724A8MTY0 619 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 NPIPA2E9PIF3 369 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 G3V2L1 256 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 H0YL77 283 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 IMPA2O14732 288 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 CTAGE5O15320 804 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 MAGEB3O15480 346 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 NEBLO76041 1014 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 UFL1O94874 794 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 IGSF6O95976 241 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 OAS1P00973 400 aaKnown RBP2.72□□□□□ -1.97
BRCA2-203ENST00000528762 CSF2P04141 144 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 SP1P08047 785 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 ZSCAN5DPP0CG00 497 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 ADORA3P0DMS8 318 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 CHI3L1P36222 383 aaPredicted RBP2.72□□□□□ -1.97
BRCA2-203ENST00000528762 DLSTP36957 453 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 TAGLN2P37802 199 aaKnown RBP2.72□□□□□ -1.97
BRCA2-203ENST00000528762 PGFP49763 221 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 SLC7A2P52569 658 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 KRTAP10-5P60370 271 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 PDK4Q16654 411 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 UPP1Q16831 310 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 TATDN3Q17R31 274 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 CCDC57Q2TAC2 916 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 TMEM30BQ3MIR4 351 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 CFAP157Q5JU67 520 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 ARHGAP11AQ6P4F7 1023 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 BLOC1S2Q6QNY1 142 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 Q7L0L9 218 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 NOTCH2NLQ7Z3S9 236 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 NET1Q7Z628 596 aaPredicted RBP2.72□□□□□ -1.97
BRCA2-203ENST00000528762 SPEM1Q8N4L4 309 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 SAMD12Q8N8I0 201 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 OR5AU1Q8NGC0 362 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 C11orf52Q96A22 123 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 ADIPOR1Q96A54 375 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 ATXN7L3BQ96GX2 97 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 HPDLQ96IR7 371 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 RCHY1Q96PM5 261 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 VPS35Q96QK1 796 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 SECISBP2Q96T21 854 aaKnown RBP2.72□□□□□ -1.97
BRCA2-203ENST00000528762 LITAFQ99732 161 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 TBCDQ9BTW9 1192 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 APOOQ9BUR5 198 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 STRADBQ9C0K7 418 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 SP140LQ9H930 580 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 MEAF6Q9HAF1 191 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 POLD4Q9HCU8 107 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 FAM114A2Q9NRY5 505 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 KLRF1Q9NZS2 232 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 THEGQ9P2T0 379 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 EMCNQ9ULC0 261 aa2.72□□□□□ -1.97
BRCA2-203ENST00000528762 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.72□□□□□ -1.97
BRCA2-203ENST00000528762 EXOGQ9Y2C4 368 aaKnown RBP2.72□□□□□ -1.97
BRCA2-203ENST00000528762 MRPS7Q9Y2R9 242 aaKnown RBP2.72□□□□□ -1.97
BRCA2-203ENST00000528762 DDX49Q9Y6V7 483 aaKnown RBP2.72□□□□□ -1.97
BRCA2-203ENST00000528762 PTCH1Q13635 1447 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 IGHV3-38A0A0C4DH36 116 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 TRBV5-4A0A0C4DH59 114 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 MBLAC1A4D2B0 266 aaPredicted RBP2.71□□□□□ -1.98
BRCA2-203ENST00000528762 LRRC30A6NM36 301 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 WASHC1A8K0Z3 465 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 RNF212BA8MTL3 300 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 A8MUI8 341 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 H3BMH7 237 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 K7EQM0 130 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 UBXN8O00124 270 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 AP3B1O00203 1094 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 RANBP6O60518 1105 aaKnown RBP2.71□□□□□ -1.98
BRCA2-203ENST00000528762 JAK2O60674 1132 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 SDC3O75056 442 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 ZFAND5O76080 213 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 RHOBTB1O94844 696 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 DUS4LO95620 317 aaKnown RBP2.71□□□□□ -1.98
BRCA2-203ENST00000528762 CAPN1P07384 714 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 CPN1P15169 458 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 CALML3P27482 149 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 SAA4P35542 130 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 CYLC1P35663 651 aaPredicted RBP2.71□□□□□ -1.98
BRCA2-203ENST00000528762 HTR5AP47898 357 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 HILS1P60008 231 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 OSTNP61366 133 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 GSTO1P78417 241 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 IL9RQ01113 521 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 RIPK1Q13546 671 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 ZNF146Q15072 292 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 NECTIN1Q15223 517 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 KRTAP24-1Q3LI83 254 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 MOGAT2Q3SYC2 334 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 RABL6Q3YEC7 729 aaPredicted RBP2.71□□□□□ -1.98
BRCA2-203ENST00000528762 ZFP69Q49AA0 526 aa2.71□□□□□ -1.98
BRCA2-203ENST00000528762 TAF3Q5VWG9 929 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms