RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 TCTE1Q5JU00 501 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 C6orf132Q5T0Z8 1188 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 FHL5Q5TD97 284 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 KLHL17Q6TDP4 642 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 CCDC71Q8IV32 467 aaPredicted RBP13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 PEX5LQ8IYB4 626 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 FAM160A2Q8N612 972 aaPredicted RBP13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 VANGL1Q8TAA9 524 aaPredicted RBP13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 SLC38A4Q969I6 547 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 Q96MT0 163 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 ZNF285Q96NJ3 590 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 CSF3RQ99062 836 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 LHPPQ9H008 270 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 KLHL25Q9H0H3 589 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 ARMC7Q9H6L4 198 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 ERVK-18Q9QC07 812 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 NDOR1Q9UHB4 597 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 PLCL2Q9UPR0 1127 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 CLCA2Q9UQC9 943 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 TMEM131Q92545 1883 aa13.83□□□□□ -0.2
ECHDC1-220ENST00000528402 HYKKA2RU49 373 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 TTC36A6NLP5 189 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 CLCA1A8K7I4 914 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 XPNPEP2O43895 674 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 RNH1P13489 461 aaKnown RBP13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 GABRB1P18505 474 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 CCNA2P20248 432 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 MAZP56270 477 aaKnown RBP13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 CHRNEQ04844 493 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 ST3GAL3Q11203 375 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 MAP4K2Q12851 820 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 DUSP8Q13202 625 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 TRAM2Q15035 370 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 LTB4RQ15722 352 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 WDR45BQ5MNZ6 344 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 SYT6Q5T7P8 510 aaPredicted RBP13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 ANKRD13BQ86YJ7 626 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 ZNF595Q8IYB9 648 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 UBALD2Q8IYN6 164 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 ARHGEF39Q8N4T4 335 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 OR6C4Q8NGE1 309 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 OR52P1PQ8NH57 321 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 APH1BQ8WW43 257 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 DNASE2BQ8WZ79 361 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 GTPBP3Q969Y2 492 aaKnown RBP13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 ZDHHC12Q96GR4 267 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 SAP130Q9H0E3 1048 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 EQTNQ9NQ60 294 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 RASSF1Q9NS23 344 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 FKBP14Q9NWM8 211 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 PAK1IP1Q9NWT1 392 aaPredicted RBP13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 CLN6Q9NWW5 311 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 RHCGQ9UBD6 479 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 FTSJ1Q9UET6 329 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 PSORS1C1Q9UIG5 152 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 CDC14AQ9UNH5 594 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 PCDHGA10Q9Y5H3 936 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 KCNE3Q9Y6H6 103 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 CSNK1G3Q9Y6M4 447 aa13.82□□□□□ -0.2
ECHDC1-220ENST00000528402 A0A1W2PS29 197 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 EFCAB10A6NFE3 127 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 SLC9B1P1A6NJY1 282 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 H3BMQ9 156 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 CLDN4O14493 209 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 AP3D1O14617 1153 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 NME6O75414 186 aaPredicted RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 STX11O75558 287 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 NSA2O95478 260 aaKnown RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 NT5EP21589 574 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 CHMP24386 653 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 CTSKP43235 329 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 CXCL12P48061 93 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 IDH2P48735 452 aaKnown RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 ST13P50502 369 aaKnown RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 SNRPGP62308 76 aaKnown RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 SHC2P98077 582 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 ZSWIM7Q19AV6 140 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 PRICKLE4Q2TBC4 344 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 INAVAQ3KP66 663 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 SLX4IPQ5VYV7 408 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 C1orf94Q6P1W5 598 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 PGBD2Q6P3X8 592 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 SLC16A11Q8NCK7 471 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 OR4D11Q8NGI4 311 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 OR6T1Q8NGN1 323 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 C9orf43Q8TAL5 461 aaPredicted RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 GNPDA2Q8TDQ7 276 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 FAR1Q8WVX9 515 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 SLC9A6Q92581 669 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 CTHRC1Q96CG8 243 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 CRELD1Q96HD1 420 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 COG8Q96MW5 612 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 ZNF578Q96N58 590 aaPredicted RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 SIGLEC11Q96RL6 698 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 RSPO3Q9BXY4 272 aaPredicted RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 FOXQ1Q9C009 403 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 ERVMER34-1Q9H9K5 563 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 ENAMQ9NRM1 1142 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 CNOT2Q9NZN8 540 aaKnown RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 REV1Q9UBZ9 1251 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms