RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 TUBB1Q9H4B7 451 aa30.28■■■□□ 2.44
SSSCA1-205ENST00000527920 PNPLA3Q9NST1 481 aa30.28■■■□□ 2.44
SSSCA1-205ENST00000527920 PCDHGB3Q9Y5G1 929 aa30.28■■■□□ 2.44
SSSCA1-205ENST00000527920 TYROBPO43914 113 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 TUBBP07437 444 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 CHRNGP07510 517 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 IFI6P09912 130 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 FNDC7Q5VTL7 733 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 BICRALQ6AI39 1079 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 CLYBLQ8N0X4 340 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 OR7G2Q8NG99 324 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 UBQLN3Q9H347 655 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 TAS2R9Q9NYW1 312 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 TMED5Q9Y3A6 229 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 PTGDR2Q9Y5Y4 395 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 TEX15Q9BXT5 2789 aa30.27■■■□□ 2.44
SSSCA1-205ENST00000527920 ABCB7O75027 752 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 CT45A8P0DMV1 189 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 CT45A9P0DMV2 189 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 ENDOUP21128 410 aaKnown RBP30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 ELAVL4P26378 380 aaKnown RBP30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 ACVR2AP27037 513 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 NTSP30990 170 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 CDSNQ15517 529 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 CT45A2Q5DJT8 189 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 ACAD11Q709F0 780 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 OR2T11Q8NH01 316 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 NEIL3Q8TAT5 605 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 MARVELD3Q96A59 401 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 RUBCNLQ9H714 662 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 METTL7AQ9H8H3 244 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 C15orf41Q9Y2V0 281 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 TRAF6Q9Y4K3 522 aa30.26■■■□□ 2.43
SSSCA1-205ENST00000527920 EXPH5Q8NEV8 1989 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 OR6C70A6NIJ9 312 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 PLOD2O00469 737 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 WDR1O75083 606 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 COQ9O75208 318 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 ERN1O75460 977 aaKnown RBP30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 HOXD4P09016 255 aaPredicted RBP30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 GDF1P27539 372 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 MASP1P48740 699 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 NCBP2P52298 156 aaKnown RBP eCLIP30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 ZNF844Q08AG5 666 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 PRSS53Q2L4Q9 553 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 UGT3A2Q3SY77 523 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 WLSQ5T9L3 541 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 SLC30A6Q6NXT4 461 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 ASB5Q8WWX0 329 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 RND1Q92730 232 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 SDCCAG3Q96C92 435 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 EXO5Q9H790 373 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 ANKRA2Q9H9E1 313 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 ACAD8Q9UKU7 415 aa30.25■■■□□ 2.43
SSSCA1-205ENST00000527920 LSM1O15116 133 aaKnown RBP30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 UGT2B11O75310 529 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 TACR1P25103 407 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 ETV4P43268 484 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 KRT71Q3SY84 523 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 TIGD3Q6B0B8 471 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 OR5M9Q8NGP3 310 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 OR6Y1Q8NGX8 325 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 CA5BP1Q8WTZ4 195 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 TWIST2Q8WVJ9 160 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 SLC35A4Q96G79 324 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 AMDHD1Q96NU7 426 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 FOLH1BQ9HBA9 442 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 SPRR3Q9UBC9 169 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 FIS1Q9Y3D6 152 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 NINQ8N4C6 2090 aa30.24■■■□□ 2.43
SSSCA1-205ENST00000527920 TBX19O60806 448 aa30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 JUNP05412 331 aaKnown RBP30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 HPNP05981 417 aa30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 BPGMP07738 259 aa30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 CREB1P16220 341 aa30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 CDK9P50750 372 aaKnown RBP30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 LIX1Q8N485 282 aa30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 TMBIM1Q969X1 311 aa30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 EGLN2Q96KS0 407 aa30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 COL21A1Q96P44 957 aa30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 SLC6A15Q9H2J7 730 aa30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 GLIPR2Q9H4G4 154 aa30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 SSU72Q9NP77 194 aaKnown RBP30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 C19orf53Q9UNZ5 99 aaPredicted RBP30.23■■■□□ 2.43
SSSCA1-205ENST00000527920 CACNA1CQ13936 2221 aa30.22■■■□□ 2.43
SSSCA1-205ENST00000527920 PSMG1O95456 288 aa30.22■■■□□ 2.43
SSSCA1-205ENST00000527920 LINC00032P0C843 101 aa30.22■■■□□ 2.43
SSSCA1-205ENST00000527920 GABRA1P14867 456 aa30.22■■■□□ 2.43
SSSCA1-205ENST00000527920 CHRNB4P30926 498 aa30.22■■■□□ 2.43
SSSCA1-205ENST00000527920 CORO7P57737 925 aa30.22■■■□□ 2.43
SSSCA1-205ENST00000527920 OR2L13Q8N349 312 aa30.22■■■□□ 2.43
SSSCA1-205ENST00000527920 RPRMLQ8N4K4 120 aa30.22■■■□□ 2.43
SSSCA1-205ENST00000527920 TMCO6Q96DC7 493 aa30.22■■■□□ 2.43
SSSCA1-205ENST00000527920 NODALQ96S42 347 aa30.22■■■□□ 2.43
SSSCA1-205ENST00000527920 OSBPL11Q9BXB4 747 aa30.22■■■□□ 2.43
SSSCA1-205ENST00000527920 CACNA1DQ01668 2161 aa30.22■■■□□ 2.43
SSSCA1-205ENST00000527920 PRAMEF25A6NGN4 478 aa30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 RGS16O15492 202 aaPredicted RBP30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 SDC1P18827 310 aa30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 PTGER4P35408 488 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms