RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 ICMTO60725 284 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 COQ9O75208 318 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 RAB3DO95716 219 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 OPN1SWP03999 348 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 GP1BBP13224 206 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 PGCP20142 388 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 RBMS1P29558 406 aaKnown RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 HOXD11P31277 338 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 PRSS3P35030 304 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 PLA2G16P53816 162 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 RUNX2Q13950 521 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 ZNF630Q2M218 657 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 RNF212Q495C1 297 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 PDLIM3Q53GG5 364 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 PPM1JQ5JR12 505 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 EXOSC6Q5RKV6 272 aaKnown RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 FAM69AQ5T7M9 428 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 DHRS11Q6UWP2 260 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 ENPP7Q6UWV6 458 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 HACD2Q6Y1H2 254 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 ESPNLQ6ZVH7 1005 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 SETD7Q8WTS6 366 aaKnown RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 LCN9Q8WX39 176 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 GTF2H4Q92759 462 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 FOXRED1Q96CU9 486 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 MGLLQ99685 303 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 SLC2A9Q9NRM0 540 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 FAM212BQ9NTI7 297 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 ZIM2Q9NZV7 527 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 DEC1Q9P2X7 70 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 CA14Q9ULX7 337 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 SOWAHBA6NEL2 793 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 SOBPA7XYQ1 873 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 TERTO14746 1132 aaKnown RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 TCAPO15273 167 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 PMM2O15305 246 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 KDELR3O43731 214 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 HLA-HP01893 362 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 MT-ND4LP03901 98 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 ITGB2P05107 769 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 ADRB3P13945 408 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 NFYBP25208 207 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 ELK4P28324 431 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 ERVFC1P60507 584 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 TNK1Q13470 666 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 FAM162BQ5T6X4 162 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 ARHGAP40Q5TG30 622 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 OR52W1Q6IF63 320 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 GDF6Q6KF10 455 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 FUT10Q6P4F1 479 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 PRSS55Q6UWB4 352 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 RFPL4BQ6ZWI9 263 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 HIST2H3AQ71DI3 136 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 NRSN1Q8IZ57 195 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 CELF5Q8N6W0 485 aaKnown RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 ANKK1Q8NFD2 765 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 OR6T1Q8NGN1 323 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 BBS10Q8TAM1 723 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 TSPEARQ8WU66 669 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 BLNKQ8WV28 456 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 FGGYQ96C11 551 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 HSH2DQ96JZ2 352 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 HBEGFQ99075 208 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 WDR77Q9BQA1 342 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 MRM3Q9HC36 420 aaKnown RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 GAR1Q9NY12 217 aaKnown RBP6.91□□□□□ -1.3
CTNND1-216ENST00000527467 GAB2Q9UQC2 676 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 B3GNT3Q9Y2A9 372 aa6.91□□□□□ -1.3
CTNND1-216ENST00000527467 A6NLC8 198 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 A8MVM7 634 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 F6UZH7 168 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 EIF3FO00303 357 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-216ENST00000527467 CCL16O15467 120 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 SOX30O94993 753 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 BCHEP06276 602 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 MMP7P09237 267 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-216ENST00000527467 CSF1P09603 554 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 PABPC4LP0CB38 370 aaKnown RBP6.9□□□□□ -1.3
CTNND1-216ENST00000527467 GGT1P19440 569 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 SNCAP37840 140 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 GSK3BP49841 420 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 SCNN1GP51170 649 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 LCN6P62502 163 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 ACY1Q03154 408 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 GK3PQ14409 553 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 EMC10Q5UCC4 262 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 RSPO2Q6UXX9 243 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-216ENST00000527467 ZNF662Q6ZS27 426 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 TIPARPQ7Z3E1 657 aaKnown RBP6.9□□□□□ -1.3
CTNND1-216ENST00000527467 SLC9A9Q8IVB4 645 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 HS3ST5Q8IZT8 346 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 C1orf87Q8N0U7 546 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 SLC7A13Q8TCU3 470 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 SORCS1Q8WY21 1168 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 POLDIP3Q9BY77 421 aaKnown RBP6.9□□□□□ -1.3
CTNND1-216ENST00000527467 PCED1AQ9H1Q7 454 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 ACSS2Q9NR19 701 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 OSGIN2Q9Y236 505 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 ARL2-SNX15V9GYD0 113 aa6.9□□□□□ -1.3
CTNND1-216ENST00000527467 A0A1W2PPL8 197 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms