RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 UQCRC2P22695 453 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 CD96P40200 585 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 CD97P48960 835 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 TRPC1P48995 793 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 PRIM2P49643 509 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 TMED10P49755 219 aaKnown RBP19.17■□□□□ 0.66
CD44-222ENST00000526025 NR0B1P51843 470 aaKnown RBP19.17■□□□□ 0.66
CD44-222ENST00000526025 ZNF155Q12901 538 aaPredicted RBP19.17■□□□□ 0.66
CD44-222ENST00000526025 KLRB1Q12918 225 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 ZNHIT3Q15649 155 aaPredicted RBP19.17■□□□□ 0.66
CD44-222ENST00000526025 TIGD2Q4W5G0 525 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 MFSD12Q6NUT3 480 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 LYPD8Q6UX82 237 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 C16orf47Q6ZP98 133 aaPredicted RBP19.17■□□□□ 0.66
CD44-222ENST00000526025 MDS2Q8NDY4 140 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 SLC39A7Q92504 469 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 PNPLA2Q96AD5 504 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 PANX1Q96RD7 426 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 LIN28AQ9H9Z2 209 aaKnown RBP19.17■□□□□ 0.66
CD44-222ENST00000526025 SERHLQ9NQF3 203 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 PLA2G3Q9NZ20 509 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 ERVK-11Q9UQG0 969 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 B3GNT3Q9Y2A9 372 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 SNX8Q9Y5X2 465 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 BOD1L1Q8NFC6 3051 aa19.17■□□□□ 0.66
CD44-222ENST00000526025 A8MVJ9 347 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 CCDC22O60826 627 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 NEURL1O76050 574 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 ABCB1P08183 1280 aaPredicted RBP19.16■□□□□ 0.66
CD44-222ENST00000526025 ZCCHC18P0CG32 403 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 SOX3P41225 446 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 MAGEA8P43361 318 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 TXNL4AP83876 142 aaKnown RBP19.16■□□□□ 0.66
CD44-222ENST00000526025 PSG6Q00889 435 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 OR1C1Q15619 314 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 MAPKAPK3Q16644 382 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 ZNF791Q3KP31 576 aaPredicted RBP19.16■□□□□ 0.66
CD44-222ENST00000526025 SPDYE7PQ495Y7 208 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 PIGWQ7Z7B1 504 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 GOLM1Q8NBJ4 401 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 SPACA9Q96E40 222 aaPredicted RBP19.16■□□□□ 0.66
CD44-222ENST00000526025 MAGED4Q96JG8 741 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 PHF12Q96QT6 1004 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 FAM107BQ9H098 131 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 GPATCH2Q9NW75 528 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 HPF1Q9NWY4 346 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 LRFN1Q9P244 771 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 VPS4AQ9UN37 437 aa19.16■□□□□ 0.66
CD44-222ENST00000526025 RNF103-CHMP3A0A140T963 221 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 A0A1W2PP18 115 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 NR5A2O00482 541 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 RFXANKO14593 260 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 ZNF354AO60765 605 aaPredicted RBP19.15■□□□□ 0.66
CD44-222ENST00000526025 OR6B1O95007 311 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 NKX2-2O95096 273 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 CPSF4O95639 269 aaKnown RBP19.15■□□□□ 0.66
CD44-222ENST00000526025 HMGN2P05204 90 aaKnown RBP19.15■□□□□ 0.66
CD44-222ENST00000526025 OC90Q02509 493 aaPredicted RBP19.15■□□□□ 0.66
CD44-222ENST00000526025 ZNF169Q14929 603 aaPredicted RBP19.15■□□□□ 0.66
CD44-222ENST00000526025 NTRK2Q16620 822 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 CYP27C1Q4G0S4 372 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 ZNF468Q5VIY5 522 aaPredicted RBP19.15■□□□□ 0.66
CD44-222ENST00000526025 SLC6A19Q695T7 634 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 NPSR1Q6W5P4 371 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 SLC34A3Q8N130 599 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 CYP4Z2PQ8N1L4 340 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 MIPOL1Q8TD10 442 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 VPS33AQ96AX1 596 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 STACQ99469 402 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 DUSP22Q9NRW4 184 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 ANAPC2Q9UJX6 822 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 NPFFR2Q9Y5X5 522 aa19.15■□□□□ 0.66
CD44-222ENST00000526025 ABCB7O75027 752 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 FAM107AO95990 144 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 CD46P15529 392 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 CAPN3P20807 821 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 ABCD3P28288 659 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 SOAT1P35610 550 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 PRKAG1P54619 331 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 CORO7P57737 925 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 TP53BP2Q13625 1128 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 MAPRE2Q15555 327 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 INAQ16352 499 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 SAXO2Q658L1 398 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 RPUSD3Q6P087 351 aaKnown RBP19.14■□□□□ 0.65
CD44-222ENST00000526025 CDC73Q6P1J9 531 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 RTL4Q6ZR62 310 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 SZRD1Q7Z422 152 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 ZNF227Q86WZ6 799 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 TEX19Q8NA77 164 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 DNAJB8Q8NHS0 232 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 GTF2H4Q92759 462 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 NEURL3Q96EH8 262 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 SCMH1Q96GD3 660 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 BBC3Q96PG8 261 aaPredicted RBP19.14■□□□□ 0.65
CD44-222ENST00000526025 SECISBP2Q96T21 854 aaKnown RBP19.14■□□□□ 0.65
CD44-222ENST00000526025 ACTRT3Q9BYD9 372 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 NMUR2Q9GZQ4 415 aa19.14■□□□□ 0.65
CD44-222ENST00000526025 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.14■□□□□ 0.65
CD44-222ENST00000526025 Q9N2J8 555 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms