RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 A0A1B0GTL3 188 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 C1orf226A1L170 272 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 ATP1B1P05026 303 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 DIO3P55073 304 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 GFRA1P56159 465 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 CAV1Q03135 178 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 DUSP2Q05923 314 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 IFT88Q13099 833 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 TRAF3Q13114 568 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 TRADDQ15628 312 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 LTB4RQ15722 352 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 FAM180BQ6P0A1 224 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 COMMD6Q7Z4G1 85 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 OR52R1Q8NGF1 315 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 KLHL29Q96CT2 875 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 NSUN5Q96P11 429 aaKnown RBP21.74■■□□□ 1.07
USP47-205ENST00000525257 UCN2Q96RP3 112 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 VPS11Q9H270 941 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 ACBD3Q9H3P7 528 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 NDRG3Q9UGV2 375 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 PACSIN3Q9UKS6 424 aa21.74■■□□□ 1.07
USP47-205ENST00000525257 UTP11Q9Y3A2 253 aaKnown RBP21.74■■□□□ 1.07
USP47-205ENST00000525257 JMJD1CQ15652 2540 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 A8MXE2 369 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 PLOD2O00469 737 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 GUCY1B2O75343 617 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 ALDOAP04075 364 aaKnown RBP21.73■■□□□ 1.07
USP47-205ENST00000525257 HEXAP06865 529 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 CSNK2A2P19784 350 aaPredicted RBP21.73■■□□□ 1.07
USP47-205ENST00000525257 TCEA1P23193 301 aaKnown RBP21.73■■□□□ 1.07
USP47-205ENST00000525257 TYK2P29597 1187 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 SERPINB8P50452 374 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 LHX2P50458 406 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 TRMT12Q53H54 448 aaKnown RBP21.73■■□□□ 1.07
USP47-205ENST00000525257 Q5PR19 223 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 ZDHHC24Q6UX98 284 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 TAOK1Q7L7X3 1001 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 GRAMD2AQ8IUY3 354 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 PLD6Q8N2A8 252 aaKnown RBP21.73■■□□□ 1.07
USP47-205ENST00000525257 ARSGQ96EG1 525 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 NTMT1Q9BV86 223 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 ZBTB26Q9HCK0 441 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 C6orf203Q9P0P8 240 aaPredicted RBP21.73■■□□□ 1.07
USP47-205ENST00000525257 FBXL2Q9UKC9 423 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 PCTPQ9UKL6 214 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 SLC12A4Q9UP95 1085 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 TESMINQ9Y4I5 508 aa21.73■■□□□ 1.07
USP47-205ENST00000525257 ARHGEF9O43307 516 aa21.72■■□□□ 1.07
USP47-205ENST00000525257 PPICP45877 212 aa21.72■■□□□ 1.07
USP47-205ENST00000525257 MRPS35P82673 323 aaKnown RBP21.72■■□□□ 1.07
USP47-205ENST00000525257 HMGCS1Q01581 520 aa21.72■■□□□ 1.07
USP47-205ENST00000525257 GAB1Q13480 694 aa21.72■■□□□ 1.07
USP47-205ENST00000525257 PLCZ1Q86YW0 608 aa21.72■■□□□ 1.07
USP47-205ENST00000525257 P3H2Q8IVL5 708 aa21.72■■□□□ 1.07
USP47-205ENST00000525257 ZNF592Q92610 1267 aa21.72■■□□□ 1.07
USP47-205ENST00000525257 TMBIM1Q969X1 311 aa21.72■■□□□ 1.07
USP47-205ENST00000525257 CTHRC1Q96CG8 243 aa21.72■■□□□ 1.07
USP47-205ENST00000525257 SFXN2Q96NB2 322 aa21.72■■□□□ 1.07
USP47-205ENST00000525257 COL21A1Q96P44 957 aa21.72■■□□□ 1.07
USP47-205ENST00000525257 ELOVL6Q9H5J4 265 aa21.72■■□□□ 1.07
USP47-205ENST00000525257 FARSBQ9NSD9 589 aaKnown RBP21.72■■□□□ 1.07
USP47-205ENST00000525257 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 A0A1W2PNV4 684 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 REM1O75628 298 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 TNFSF13O75888 250 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 LY6G6DO95868 133 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 TGM6O95932 706 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 PCSK2P16519 638 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 DRD5P21918 477 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 SRD5A2P31213 254 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 ALDH9A1P49189 494 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 EMDP50402 254 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 CLDN18P56856 261 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 GUCY2DQ02846 1103 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 C10orf62Q5T681 223 aaPredicted RBP21.71■■□□□ 1.07
USP47-205ENST00000525257 AAGABQ6PD74 315 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 SCIMPQ6UWF3 145 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 OR4F6Q8NGB9 312 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 TRPC4APQ8TEL6 797 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 TM4SF18Q96CE8 201 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 TMCO6Q96DC7 493 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 PRODH2Q9UF12 536 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 DKKL1Q9UK85 242 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 WIF1Q9Y5W5 379 aa21.71■■□□□ 1.07
USP47-205ENST00000525257 ARID1AO14497 2285 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 FRG2CA6NGY1 282 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 OR6C70A6NIJ9 312 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 TO15178 435 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 SMPD2O60906 423 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 SMNDC1O75940 238 aaKnown RBP eCLIP21.7■■□□□ 1.06
USP47-205ENST00000525257 ZNF708P17019 499 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 CHMP24386 653 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 FAM27E3Q08E93 113 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 GALNT1Q10472 559 aaPredicted RBP21.7■■□□□ 1.06
USP47-205ENST00000525257 FAM219BQ5XKK7 198 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 OR5M10Q6IEU7 315 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 RPS27LQ71UM5 84 aaKnown RBP21.7■■□□□ 1.06
USP47-205ENST00000525257 P4HA3Q7Z4N8 544 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 MILR1Q7Z6M3 343 aa21.7■■□□□ 1.06
USP47-205ENST00000525257 CNRIP1Q96F85 164 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms