RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 FRG2CA6NGY1 282 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 NPIPB8E9PQR5 432 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 GNB5O14775 395 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 LSM1O15116 133 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 ACOX3O15254 700 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 ITM2AO43736 263 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 UGT2B11O75310 529 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 ERN1O75460 977 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 SKAP2O75563 359 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 LYPLA1O75608 230 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 REM1O75628 298 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 TRAPPC6AO75865 159 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 BCAS2O75934 225 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 CT45A8P0DMV1 189 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 CT45A9P0DMV2 189 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 NEFHP12036 1026 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 SDC1P18827 310 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 GDF1P27539 372 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 HTR1EP28566 365 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 NTSP30990 170 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 MC3RP41968 323 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 SERPINB4P48594 390 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 MASP1P48740 699 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 DCAF7P61962 342 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 RPP38P78345 283 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 ART3Q13508 389 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 CT45A2Q5DJT8 189 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 TBCELQ5QJ74 424 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 CES4AQ5XG92 561 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 XKRXQ6PP77 449 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 NPSR1Q6W5P4 371 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 IKBIPQ70UQ0 350 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 ZNF551Q7Z340 670 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 NUP54Q7Z3B4 507 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 SLC34A3Q8N130 599 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 MARVELD2Q8N4S9 558 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 PPP1R14CQ8TAE6 165 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 HGDQ93099 445 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 CIDECQ96AQ7 238 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 METTL2AQ96IZ6 378 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 C3orf30Q96M34 536 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 AMDHD1Q96NU7 426 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 GNRHR2Q96P88 292 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 KCNK9Q9NPC2 374 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 RYDENQ9NUL5 291 aaKnown RBP11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 ALKBH4Q9NXW9 302 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 TAS2R7Q9NYW3 318 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 SPRR3Q9UBC9 169 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 ACAD8Q9UKU7 415 aa11.77□□□□□ -0.53
TRAPPC4-205ENST00000525079 A0A1B0GVC2 190 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 AQP7O14520 342 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 PLOD3O60568 738 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 PEX11AO75192 247 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 SNX4O95219 450 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 NAGAP17050 411 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 ENDOUP21128 410 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 ZNF155Q12901 538 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 MPP2Q14168 576 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 TOMM20Q15388 145 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 ZNF385BQ569K4 471 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 FNDC7Q5VTL7 733 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 ANGPTL8Q6UXH0 198 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 RNF165Q6ZSG1 346 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 WDR53Q7Z5U6 358 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 SLC44A2Q8IWA5 706 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 OR4N2Q8NGD1 307 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 OR6Y1Q8NGX8 325 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 PHF10Q8WUB8 498 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 SDCCAG3Q96C92 435 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 ERP27Q96DN0 273 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 FCRL1Q96LA6 429 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 VSTM2LQ96N03 204 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 ADOQ96SZ5 270 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 SECISBP2Q96T21 854 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 CCT7Q99832 543 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 TP63Q9H3D4 680 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 REEP4Q9H6H4 257 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 GALNT9Q9HCQ5 603 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 TAS2R9Q9NYW1 312 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 SH3BP4Q9P0V3 963 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 B4GALT7Q9UBV7 327 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 WBP11Q9Y2W2 641 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 ZNF407Q9C0G0 2248 aa11.76□□□□□ -0.53
TRAPPC4-205ENST00000525079 OR14I1A6ND48 311 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 UPK1AO00322 258 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 BCKDKO14874 412 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 TO15178 435 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 PDPK1O15530 556 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 SUSD5O60279 629 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 HCN1O60741 890 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 ICOSLGO75144 302 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 CLDN14O95500 239 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 HSPA4LO95757 839 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 TUBBP07437 444 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 SNRPB2P08579 225 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 BCKDHAP12694 445 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 EFNA1P20827 205 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 SERPINB5P36952 375 aa11.75□□□□□ -0.53
TRAPPC4-205ENST00000525079 PTGDSP41222 190 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms