RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 HLA-DPB1P04440 258 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 C4BPBP20851 252 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 NAA10P41227 235 aaPredicted RBP12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 METAP1P53582 386 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 ADPRHP54922 357 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 ALG10BQ5I7T1 473 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF683Q8IZ20 524 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 ANKRD60Q9BZ19 345 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 PITHD1Q9GZP4 211 aaPredicted RBP12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 MKRN2Q9H000 416 aaKnown RBP12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 GNG8Q9UK08 70 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 ABCG2Q9UNQ0 655 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 GPR52Q9Y2T5 361 aa12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNFX1Q9P2E3 1918 aaKnown RBP12.36□□□□□ -0.43
PCDHGB1-201ENST00000523390 RNF13O43567 381 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 TRIM3O75382 744 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 CLPXO76031 633 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 SOX30O94993 753 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 AIFM1O95831 613 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 TACSTD2P09758 323 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 TXNL4AP83876 142 aaKnown RBP12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 TUBA3CQ13748 450 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 DSG2Q14126 1118 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 ERV3-1Q14264 604 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 LIPKQ5VXJ0 399 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 GTF2IRD2BQ6EKJ0 949 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 GTF2IRD2Q86UP8 949 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 HORMAD2Q8N7B1 307 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 PTGES2Q9H7Z7 377 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 GPR83Q9NYM4 423 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 CNIH4Q9P003 139 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 LRIT1Q9P2V4 623 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 B4GAT1O43505 415 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 PRKRAO75569 313 aaKnown RBP12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 RAB36O95755 333 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 CASRP41180 1078 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF41P51814 821 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 CDKN3Q16667 212 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 CCDC115Q96NT0 180 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 MGLLQ99685 303 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 POT1Q9NUX5 634 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 ERVK-19Q9WJR5 959 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 A0A1B0GTL3 188 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 EIF1AYO14602 144 aaKnown RBP12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 NDUFV2P19404 249 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 ITGB8P26012 769 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 GSTM2P28161 218 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 RORAP35398 523 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 AHRP35869 848 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 GPR18Q14330 331 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 MLF2Q15773 248 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 TSPYL5Q86VY4 417 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR6N1Q8NGY5 312 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 LPAR4Q99677 370 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 MS4A8Q9BY19 250 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 FER1L6Q2WGJ9 1857 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 OXSR1O95747 527 aaPredicted RBP12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 TFAP2AP05549 437 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 UGT2B7P16662 529 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 TCTN1Q2MV58 587 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 XKR7Q5GH72 579 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 LYSMD4Q5XG99 296 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 GPAT4Q86UL3 456 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 PRR22Q8IZ63 422 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 LRRC17Q8N6Y2 441 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 CDS1Q92903 461 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZDHHC5Q9C0B5 715 aa12.35□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF195O14628 629 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 DHFRP00374 187 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 ADORA3P0DMS8 318 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF404Q494X3 552 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 FAM219BQ5XKK7 198 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 CBLL1Q75N03 491 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 RAB43Q86YS6 212 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR6C4Q8NGE1 309 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR8J2Q8NGG1 315 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 CCRL2O00421 344 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 GKN3PP0CG01 181 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 CSTF1Q05048 431 aaKnown RBP12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 MAP4K2Q12851 820 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 PMS2P3Q13401 168 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 E2F2Q14209 437 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 MICAQ29983 383 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 METRNLQ641Q3 311 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 C7orf57Q8NEG2 295 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR6N2Q8NGY6 317 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 RNASE11Q8TAA1 199 aaKnown RBP12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 SGTBQ96EQ0 304 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF597Q96LX8 424 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 GFM1Q96RP9 751 aaKnown RBP12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 LGR4Q9BXB1 951 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 CLEC4MQ9H2X3 399 aaPredicted RBP12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 SIPA1L1O43166 1804 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 TRAPPC13A5PLN9 417 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 C17orf105B2RV13 164 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 TARM1B6A8C7 271 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 GFYI3L273 518 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 PRAMEF2O60811 474 aa12.34□□□□□ -0.43
PCDHGB1-201ENST00000523390 VNN2O95498 520 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms