RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 IMMP1LQ96LU5 166 aa12.43□□□□□ -0.42
CLK4-210ENST00000522136 VSTM2LQ96N03 204 aa12.43□□□□□ -0.42
CLK4-210ENST00000522136 ITPAQ9BY32 194 aa12.43□□□□□ -0.42
CLK4-210ENST00000522136 RAD21L1Q9H4I0 556 aa12.43□□□□□ -0.42
CLK4-210ENST00000522136 LIN28AQ9H9Z2 209 aaKnown RBP12.43□□□□□ -0.42
CLK4-210ENST00000522136 ZNF160Q9HCG1 818 aa12.43□□□□□ -0.42
CLK4-210ENST00000522136 DNAJA2O60884 412 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 NCK1P16333 377 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 GABRA3P34903 492 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 MAP3K8P41279 467 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 KHKP50053 298 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 PSG6Q00889 435 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 BTBD16Q32M84 506 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 EXOSC6Q5RKV6 272 aaKnown RBP12.42□□□□□ -0.42
CLK4-210ENST00000522136 GCNT6Q5T4J0 391 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 ATP1A1-AS1Q5TC04 95 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 NET1Q7Z628 596 aaPredicted RBP12.42□□□□□ -0.42
CLK4-210ENST00000522136 MRGPREQ86SM8 312 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 ARHGAP24Q8N264 748 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 CDRT4Q8N9R6 151 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 ADAMTS17Q8TE56 1095 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 ADAMTS15Q8TE58 950 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 PIK3R3Q92569 461 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 CDS1Q92903 461 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 FGF11Q92914 225 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 P4HTMQ9NXG6 502 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 COPS7AQ9UBW8 275 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 FBXL4Q9UKA2 621 aa12.42□□□□□ -0.42
CLK4-210ENST00000522136 PPIEQ9UNP9 301 aaKnown RBP12.42□□□□□ -0.42
CLK4-210ENST00000522136 NSG1A0A0A6YYJ2 146 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 TRBV11-1A0A0K0K1C0 115 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 GXYLT2A0PJZ3 443 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 ELOVL7A1L3X0 281 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 FAM220BPB1ANY3 271 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 ADRB1P08588 477 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 ALOX5P09917 674 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 BMP2P12643 396 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 ATP1A4Q13733 1029 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 SYPL1Q16563 259 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 NPSR1Q6W5P4 371 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 C16orf47Q6ZP98 133 aaPredicted RBP12.41□□□□□ -0.42
CLK4-210ENST00000522136 NDUFAF7Q7L592 441 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 GALNT10Q86SR1 603 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 MICU2Q8IYU8 434 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 LGI4Q8N135 537 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 ZSCAN1Q8NBB4 408 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 OR4N2Q8NGD1 307 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 NFKBIDQ8NI38 313 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 GPR151Q8TDV0 419 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 THAP3Q8WTV1 239 aaPredicted RBP12.41□□□□□ -0.42
CLK4-210ENST00000522136 REXO5Q96IC2 774 aaKnown RBP12.41□□□□□ -0.42
CLK4-210ENST00000522136 GAL3ST4Q96RP7 486 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 FAM117AQ9C073 453 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 SEMA4CQ9C0C4 833 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 MMADHCQ9H3L0 296 aaPredicted RBP12.41□□□□□ -0.42
CLK4-210ENST00000522136 PRODH2Q9UF12 536 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 AP3M1Q9Y2T2 418 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 CDC14CA4D256 554 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 PCDH17O14917 1159 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 BCHEP06276 602 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 HTR1EP28566 365 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 ERFP50548 548 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 FUT5Q11128 374 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 MYBPC3Q14896 1274 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 EBPQ15125 230 aaKnown RBP12.41□□□□□ -0.42
CLK4-210ENST00000522136 MAPK11Q15759 364 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 VMACQ2NL98 169 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 CCNJQ5T5M9 372 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 ANKFN1Q8N957 763 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 SLC38A5Q8WUX1 472 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 HOXB13Q92826 284 aaPredicted RBP12.41□□□□□ -0.42
CLK4-210ENST00000522136 ADIPOR1Q96A54 375 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 VMP1Q96GC9 406 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 LMF2Q9BU23 707 aaKnown RBP12.41□□□□□ -0.42
CLK4-210ENST00000522136 NXF5Q9H1B4 397 aaKnown RBP12.41□□□□□ -0.42
CLK4-210ENST00000522136 PIGUQ9H490 435 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 POMPQ9Y244 141 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 MED13Q9UHV7 2174 aa12.41□□□□□ -0.42
CLK4-210ENST00000522136 C2orf92A0A1B0GVN3 265 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 A0A1W2PQ72 361 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 A8MVJ9 347 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 NKX2-8O15522 239 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 NKX2-2O95096 273 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 TFPTP0C1Z6 253 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 CT45A8P0DMV1 189 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 CT45A9P0DMV2 189 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 ARAFP10398 606 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 RNF4P78317 190 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 Q0VFX4 171 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 TRIM25Q14258 630 aaKnown RBP12.4□□□□□ -0.42
CLK4-210ENST00000522136 CT45A2Q5DJT8 189 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 RPS26P11Q5JNZ5 115 aaPredicted RBP12.4□□□□□ -0.42
CLK4-210ENST00000522136 ZCCHC12Q6PEW1 402 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 HSDL2Q6YN16 418 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 SLC29A4Q7RTT9 530 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 RAB43Q86YS6 212 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 FIG4Q92562 907 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 DOCK10Q96BY6 2186 aa12.4□□□□□ -0.42
CLK4-210ENST00000522136 RAB3IPQ96QF0 476 aaPredicted RBP12.4□□□□□ -0.42
CLK4-210ENST00000522136 LMF1Q96S06 567 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms