RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 NELL2Q99435 816 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 A0A1W2PQL4 384 aaPredicted RBP11.09□□□□□ -0.63
SYNPO-204ENST00000519664 ADH1BP00325 375 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 TIMP1P01033 207 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 CYP17A1P05093 508 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 ENDOUP21128 410 aaKnown RBP11.09□□□□□ -0.63
SYNPO-204ENST00000519664 CA5AP35218 305 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 CSNK1DP48730 415 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 GMFBP60983 142 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 MEDAGQ5VYS4 303 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 SPRED1Q7Z699 444 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 CPOQ8IVL8 374 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 ACOT4Q8N9L9 421 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 SAMD8Q96LT4 415 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 TAPBPLQ9BX59 468 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 TPSD1Q9BZJ3 242 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 TTYH1Q9H313 450 aaPredicted RBP11.09□□□□□ -0.63
SYNPO-204ENST00000519664 ACOT13Q9NPJ3 140 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 USP36Q9P275 1121 aaKnown RBP11.09□□□□□ -0.63
SYNPO-204ENST00000519664 NLKQ9UBE8 527 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 HCN2Q9UL51 889 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 HS3ST2Q9Y278 367 aa11.09□□□□□ -0.63
SYNPO-204ENST00000519664 RNASET2O00584 256 aaKnown RBP11.08□□□□□ -0.64
SYNPO-204ENST00000519664 SCDO00767 359 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 EEF1E1O43324 174 aaKnown RBP11.08□□□□□ -0.64
SYNPO-204ENST00000519664 LDB3O75112 727 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 ADAP00813 363 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 MT-ND5P03915 603 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 NKX3-2P78367 333 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 HORMAD2Q8N7B1 307 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 SPERTQ8NA61 448 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 ISG20Q96AZ6 181 aaKnown RBP11.08□□□□□ -0.64
SYNPO-204ENST00000519664 ZNF419Q96HQ0 510 aaPredicted RBP11.08□□□□□ -0.64
SYNPO-204ENST00000519664 DPH1Q9BZG8 443 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 CEP250Q9BV73 2442 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 ASXL3Q9C0F0 2248 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 INMT-MINDY4F8WBC2 141 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 FUCA1P04066 466 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 IL32P24001 234 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 PCGF2P35227 344 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 TSPAN5P62079 268 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 RPL6Q02878 288 aaKnown RBP11.08□□□□□ -0.64
SYNPO-204ENST00000519664 ZNF691Q5VV52 312 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 BCDIN3DQ7Z5W3 292 aaKnown RBP11.08□□□□□ -0.64
SYNPO-204ENST00000519664 JAGN1Q8N5M9 183 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 ACBD7Q8N6N7 88 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 KLHDC7BQ96G42 594 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 PEX11GQ96HA9 241 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 FUZQ9BT04 418 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 TBC1D24Q9ULP9 559 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 APC2O95996 2303 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 TCRBV21S2A2A0A5A6 115 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 K7ESM1 405 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 HCRTR2O43614 444 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 UGDHO60701 494 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 IFNA7P01567 189 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 CR2P20023 1033 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 DDCP20711 480 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 GGT2P36268 569 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 MAP3K8P41279 467 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 HTR2BP41595 481 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 ADAM15Q13444 863 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 NAXEQ8NCW5 288 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 BRF2Q9HAW0 419 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 KCMF1Q9P0J7 381 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 ABCD2Q9UBJ2 740 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 PCDHGA2Q9Y5H1 932 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 ANKRD34BA5PLL1 514 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 OR7A10O76100 309 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 RENP00797 406 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 GYPBP06028 91 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 NDUFV2P19404 249 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 ADAM8P78325 824 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 CDKL4Q5MAI5 379 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 CSNK1A1LQ8N752 337 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 OR6N2Q8NGY6 317 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 WDR20Q8TBZ3 569 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 SLA2Q9H6Q3 261 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 NANSQ9NR45 359 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 LIPT1Q9Y234 373 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 PCDHGB6Q9Y5F9 930 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 HSPE1-MOB4S4R3N1 261 aa11.08□□□□□ -0.64
SYNPO-204ENST00000519664 DOCK5Q9H7D0 1870 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 H7C0S8 307 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 ARL6IP5O75915 188 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 DRD2P14416 443 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 CDK3Q00526 305 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 MTFR2Q6P444 385 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 FIGLAQ6QHK4 219 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 DPPA4Q7L190 304 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 TMED4Q7Z7H5 227 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 NEK7Q8TDX7 302 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 ABCG5Q9H222 651 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 CWH43Q9H720 699 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 EXO5Q9H790 373 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 MLXQ9UH92 298 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 PCDHGB7Q9Y5F8 929 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 TMX2-CTNND1H3BSU7 103 aa11.07□□□□□ -0.64
SYNPO-204ENST00000519664 SOX1O00570 391 aaPredicted RBP11.07□□□□□ -0.64
SYNPO-204ENST00000519664 SDC3O75056 442 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms