RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 ZNF717Q9BY31 904 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC9-206ENST00000519482 SHCBP1LQ9BZQ2 653 aa11.49□□□□□ -0.57
TRAPPC9-206ENST00000519482 DENND2DQ9H6A0 471 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC9-206ENST00000519482 DDX31Q9H8H2 851 aaKnown RBP11.49□□□□□ -0.57
TRAPPC9-206ENST00000519482 WDR41Q9HAD4 459 aa11.49□□□□□ -0.57
TRAPPC9-206ENST00000519482 RNF6Q9Y252 685 aa11.49□□□□□ -0.57
TRAPPC9-206ENST00000519482 CSMD2Q7Z408 3487 aa11.49□□□□□ -0.57
TRAPPC9-206ENST00000519482 POLQO75417 2590 aa11.49□□□□□ -0.57
TRAPPC9-206ENST00000519482 NCKAP5O14513 1909 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 NINQ8N4C6 2090 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 A0A0A6YYD5 115 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 A0A0G2JMM0 328 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 A0A1B0GVC2 190 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 A0A1W2PPB8 328 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 A0A1W2PRS3 328 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 KIR3DP1A8MWS1 328 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 G3V3Y1 287 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 BCKDKO14874 412 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 SUSD5O60279 629 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 CLDN9O95484 217 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 FAM58BPP0C7Q3 252 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 CCL3P10147 92 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 LBPP18428 481 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 CHRNB4P30926 498 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 MAGEA5P43359 124 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 MRPL19P49406 292 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 CDH13P55290 713 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 FOXO1Q12778 655 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 GSTA3Q16772 222 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 ZNF791Q3KP31 576 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 SLC22A10Q63ZE4 541 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 C18orf63Q68DL7 685 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 PGM2L1Q6PCE3 622 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 AAGABQ6PD74 315 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 CYP20A1Q6UW02 462 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 DGAT2L6Q6ZPD8 337 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 SLC29A4Q7RTT9 530 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 NUDT13Q86X67 352 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 TMEM251Q8N6I4 163 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 LILRB4Q8NHJ6 448 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 PAQR8Q8TEZ7 354 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 ZNF382Q96SR6 550 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 MRPL1Q9BYD6 325 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 RNPEPL1Q9HAU8 725 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 PCTPQ9UKL6 214 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 RNF11Q9Y3C5 154 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 ASB4Q9Y574 426 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 DNAJC15Q9Y5T4 150 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 EXPH5Q8NEV8 1989 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 FREM3P0C091 2139 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 INTS1Q8N201 2190 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 TEP1Q99973 2627 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 ADGRG4Q8IZF6 3080 aa11.48□□□□□ -0.57
TRAPPC9-206ENST00000519482 LRRC14BA6NHZ5 514 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 OR6C76A6NM76 312 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 FIGNL2A6NMB9 653 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 NPIPA2E9PIF3 369 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 NPIPA3F8WFD2 350 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 HRKO00198 91 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 AQP7O14520 342 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 TMPRSS11DO60235 418 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 OR10H2O60403 315 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 HCN1O60741 890 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 EEDO75530 441 aaKnown RBP11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 SEMA3DO95025 777 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 SIX3O95343 332 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 NADKO95544 446 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 OTCP00480 354 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 SLC35E2P0CK97 266 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 NR2F6P10588 404 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 CAPN3P20807 821 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 CPA2P48052 419 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 DNASE1L1P49184 302 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 NR0B1P51843 470 aaKnown RBP11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 CCNG1P51959 295 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 STX1BP61266 288 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 ERVK-8P63133 956 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 ZNF267Q14586 743 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 SLC10A1Q14973 349 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 SMU1Q2TAY7 513 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 C10orf62Q5T681 223 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 OGFOD2Q6N063 350 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 MEX3BQ6ZN04 569 aaKnown RBP11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 RNF111Q6ZNA4 994 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 RNF165Q6ZSG1 346 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 GPRIN3Q6ZVF9 776 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 TRILQ7L0X0 811 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 ULK2Q8IYT8 1036 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 CHTF18Q8WVB6 975 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 RIT1Q92963 219 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 STMN2Q93045 179 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 ATP6V1E2Q96A05 226 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 SPACA9Q96E40 222 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 NTMT1Q9BV86 223 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 CNPPD1Q9BV87 410 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 NOL11Q9H8H0 719 aaKnown RBP11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 SH2D2AQ9NP31 389 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 PNPLA3Q9NST1 481 aa11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 TUBA8Q9NY65 449 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-206ENST00000519482 CNIH4Q9P003 139 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms