RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 HGDQ93099 445 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 EXOSC8Q96B26 276 aaKnown RBP8.57□□□□□ -1.04
HDAC3-215ENST00000519474 HSPBAP1Q96EW2 488 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 LCORQ96JN0 433 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-215ENST00000519474 EGLN2Q96KS0 407 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 GNRHR2Q96P88 292 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 NODALQ96S42 347 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 SECISBP2Q96T21 854 aaKnown RBP8.57□□□□□ -1.04
HDAC3-215ENST00000519474 SLC39A3Q9BRY0 314 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 TMEM109Q9BVC6 243 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 EBPLQ9BY08 206 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 PARD6BQ9BYG5 372 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 TUBB1Q9H4B7 451 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 PNPLA3Q9NST1 481 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 SLC17A7Q9P2U7 560 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 TNFRSF10DQ9UBN6 386 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 LGALS13Q9UHV8 139 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 CFL2Q9Y281 166 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 GPR55Q9Y2T6 319 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-215ENST00000519474 DNAJC13O75165 2243 aa8.57□□□□□ -1.04
HDAC3-215ENST00000519474 SPTBN1Q01082 2364 aaKnown RBP8.56□□□□□ -1.04
HDAC3-215ENST00000519474 TRGV5A0A0B4J1U4 118 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 C2orf72A6NCS6 295 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 OR14I1A6ND48 311 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 MYO1GB0I1T2 1018 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 NPIPB8E9PQR5 432 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 BOLA2-SMG1P6H3BVE0 249 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 AQP7O14520 342 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 TO15178 435 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 HNRNPRO43390 633 aaKnown RBP8.56□□□□□ -1.04
HDAC3-215ENST00000519474 HCN1O60741 890 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 ICOSLGO75144 302 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 SPAG7O75391 227 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 SEC22BO75396 215 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 PPM1BO75688 479 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 SNX4O95219 450 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 CT45A8P0DMV1 189 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 CT45A9P0DMV2 189 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 DDCP20711 480 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 ENDOUP21128 410 aaKnown RBP8.56□□□□□ -1.04
HDAC3-215ENST00000519474 TACR1P25103 407 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 MPIP34949 423 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 GSTM5P46439 218 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 MAN2A2P49641 1150 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 NRG3P56975 720 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 DCAF7P61962 342 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 KCNJ2P63252 427 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 MRPS35P82673 323 aaKnown RBP8.56□□□□□ -1.04
HDAC3-215ENST00000519474 ERCC6LQ2NKX8 1250 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 CT45A2Q5DJT8 189 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 C6orf163Q5TEZ5 329 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 ZNF585AQ6P3V2 769 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 TICAM1Q8IUC6 712 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 RIBC1Q8N443 379 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-215ENST00000519474 OR9A2Q8NGT5 310 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 OR6Y1Q8NGX8 325 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 LILRB4Q8NHJ6 448 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 NEIL3Q8TAT5 605 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 CAVIN3Q969G5 261 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 MARVELD3Q96A59 401 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 SDCCAG3Q96C92 435 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 METTL2AQ96IZ6 378 aaKnown RBP8.56□□□□□ -1.04
HDAC3-215ENST00000519474 JSRP1Q96MG2 331 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-215ENST00000519474 SMC6Q96SB8 1091 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 DOHHQ9BU89 302 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 ITPAQ9BY32 194 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 TP63Q9H3D4 680 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-215ENST00000519474 GLIPR2Q9H4G4 154 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 LDAHQ9H6V9 325 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 CHST11Q9NPF2 352 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 EHD3Q9NZN3 535 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 SPRR3Q9UBC9 169 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 PRODH2Q9UF12 536 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 BOKQ9UMX3 212 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-215ENST00000519474 WBP11Q9Y2W2 641 aaKnown RBP8.56□□□□□ -1.04
HDAC3-215ENST00000519474 POLR3HQ9Y535 204 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-215ENST00000519474 DNAJC15Q9Y5T4 150 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 PTGDR2Q9Y5Y4 395 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 V9GYY5 206 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-215ENST00000519474 LRRK2Q5S007 2527 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 FREM3P0C091 2139 aa8.56□□□□□ -1.04
HDAC3-215ENST00000519474 PRRC2CQ9Y520 2896 aaKnown RBP8.55□□□□□ -1.04
HDAC3-215ENST00000519474 NCKAP5O14513 1909 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 PDLIM1O00151 329 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 SLC28A1O00337 649 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 BCKDKO14874 412 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 AZIN1O14977 448 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 PLOD3O60568 738 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 UGT2B11O75310 529 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 BCAS2O75934 225 aaPredicted RBP8.55□□□□□ -1.04
HDAC3-215ENST00000519474 RSL1D1O76021 490 aaKnown RBP8.55□□□□□ -1.04
HDAC3-215ENST00000519474 CHRNGP07510 517 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 LINC00032P0C843 101 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 VAMP1P23763 118 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 PRPH2P23942 346 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 MNAT1P51948 309 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 NUP107P57740 925 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 IFFO1Q0D2I5 559 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 RPS6KA2Q15349 733 aa8.55□□□□□ -1.04
HDAC3-215ENST00000519474 IMPG1Q17R60 797 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms