RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 LSMEM2Q8N112 164 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 EIF1ADQ8N9N8 165 aaKnown RBP2.6□□□□□ -1.99
SKP1-204ENST00000517691 PPFIBP2Q8ND30 876 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 OR2L8Q8NGY9 312 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 MDM1Q8TC05 714 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 ZCCHC14Q8WYQ9 949 aaKnown RBP2.6□□□□□ -1.99
SKP1-204ENST00000517691 NXPE2Q96DL1 559 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 RRNAD1Q96FB5 475 aaKnown RBP2.6□□□□□ -1.99
SKP1-204ENST00000517691 C5orf30Q96GV9 206 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 SLC46A1Q96NT5 459 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 OR2A14Q96R47 310 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 OR6C1Q96RD1 312 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 GPR22Q99680 433 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 RBBP8Q99708 897 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 MAP3K3Q99759 626 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 EGFL8Q99944 293 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 PKP2Q99959 881 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 RAB11FIP5Q9BXF6 653 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 GON7Q9BXV9 100 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 CAPS2Q9BXY5 557 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 PARD6BQ9BYG5 372 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 GPR61Q9BZJ8 451 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 ZNF350Q9GZX5 532 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 RAB33BQ9H082 229 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 ATG10Q9H0Y0 220 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 EVA1AQ9H8M9 152 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 PARVBQ9HBI1 364 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 OCIAD1Q9NX40 245 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 ING3Q9NXR8 418 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 ARL15Q9NXU5 204 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 HAO2Q9NYQ3 351 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 OR6C2Q9NZP2 312 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 CTNNAL1Q9UBT7 734 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 SERTAD3Q9UJW9 196 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 SNX6Q9UNH7 406 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 PDE10AQ9Y233 779 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 ACOT9Q9Y305 439 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 DOCK9Q9BZ29 2069 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 CEP295Q9C0D2 2601 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 PI4KAP42356 2102 aa2.6□□□□□ -1.99
SKP1-204ENST00000517691 NCOR2Q9Y618 2525 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 ASCC3Q8N3C0 2202 aaKnown RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 A0A087X1B8 175 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 A0A096LPK6 155 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 LOC105369274A0A096LPK9 316 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 LOC102723532A0A0G2JNH3 316 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 A0A0J9YY10 115 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 A0A1W2PNU3 283 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 ELOVL7A1L3X0 281 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 WIPF3A6NGB9 483 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 TLCD2A6NGC4 264 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 A6NL46 340 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 KDM4EB2RXH2 506 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 TRIM49D1C9J1S8 452 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 GFYI3L273 518 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 AGPSO00116 658 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 ANGPT2O15123 496 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 POLR1CO15160 346 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 SLC16A5O15375 505 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 TOX3O15405 576 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 PRAMEF10O60809 474 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SIX3O95343 332 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 ZBTB11O95625 1053 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 TSPAN12O95859 305 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SLC16A8O95907 504 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 BCL10O95999 233 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 C9P02748 559 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SHBGP04278 402 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 S100A9P06702 114 aaKnown RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 LIPFP07098 398 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SNRPAP09012 282 aaKnown RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 PIM1P11309 404 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 FOLR1P15328 257 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 ST6GAL1P15907 406 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 ZNF37AP17032 561 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 NELFEP18615 380 aaKnown RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 FUT1P19526 365 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 PSMB5P28074 263 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 PTPN4P29074 926 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 CMPK1P30085 196 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 CPOXP36551 454 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 ETV5P41161 510 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 CASRP41180 1078 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 GRIA3P42263 894 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SLCO1A2P46721 670 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SERPINB8P50452 374 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 SERPINB9P50453 376 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 ATP6V0D1P61421 351 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 HSD11B2P80365 405 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 MC2RQ01718 297 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 TNFRSF17Q02223 184 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 BNIP1Q12981 228 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 EIF3IQ13347 325 aaKnown RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 TOP3AQ13472 1001 aaPredicted RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 NAE1Q13564 534 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 DDX39BQ13838 428 aaKnown RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 GAMTQ14353 236 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 TSNQ15631 228 aaKnown RBP2.59□□□□□ -1.99
SKP1-204ENST00000517691 PHKG1Q16816 387 aa2.59□□□□□ -1.99
SKP1-204ENST00000517691 FAM83EQ2M2I3 478 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms