RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 PLEKHM3Q6ZWE6 761 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 AQP11Q8NBQ7 271 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 SLC38A9Q8NBW4 561 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 PIK3C3Q8NEB9 887 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 OR52P1PQ8NH57 321 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 NMD3Q96D46 503 aaKnown RBP9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 CCDC74BQ96LY2 380 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 DTX4Q9Y2E6 619 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 GTPBP1O00178 669 aaKnown RBP9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 DYRK3O43781 588 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 SCO2O43819 266 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 OR6B1O95007 311 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 HSMCR30P0CW71 290 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 NUDT1P36639 197 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 PIGAP37287 484 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 ITGA1P56199 1179 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 SKP1P63208 163 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 DAG1Q14118 895 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 SMN1Q16637 294 aaKnown RBP9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 ZNF630Q2M218 657 aaPredicted RBP9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 FLYWCH1Q4VC44 716 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 C10orf62Q5T681 223 aaPredicted RBP9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 EIF3MQ7L2H7 374 aaKnown RBP9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 ZAR1Q86SH2 424 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 ST13P4Q8IZP2 240 aaPredicted RBP9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 IQCF1Q8N6M8 205 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 OR10G2Q8NGC3 310 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 OR6T1Q8NGN1 323 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 FAM81AQ8TBF8 368 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 NECTIN3Q9NQS3 549 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 CNIH4Q9P003 139 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 LYVE1Q9Y5Y7 322 aa9.12□□□□□ -0.95
EFCAB13-203ENST00000517484 TRBV5-3A0A0A0MS03 114 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 PMS2P1A4D2B8 440 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 NUDT21O43809 227 aaKnown RBP9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 UGT2B17O75795 530 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 JMJD7P0C870 316 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 SERPINB1P30740 379 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 SLC35F1Q5T1Q4 408 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 SPRED1Q7Z699 444 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 CHCHD4Q8N4Q1 142 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 PHOSPHO1Q8TCT1 267 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 METTL21AQ8WXB1 218 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 SENP5Q96HI0 755 aaPredicted RBP9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 C10orf90Q96M02 699 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 JSRP1Q96MG2 331 aaPredicted RBP9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 ALPK1Q96QP1 1244 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 MS4A12Q9NXJ0 267 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 PILRAQ9UKJ1 303 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 SLC9A8Q9Y2E8 581 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 GPR55Q9Y2T6 319 aaPredicted RBP9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 DMXL1Q9Y485 3027 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 A0A1B0GTQ1 180 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 PRAMEF27A3QJZ7 478 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 AP3D1O14617 1153 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 SRPX2O60687 465 aaPredicted RBP9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 CLPTM1O96005 669 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 HEXBP07686 556 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 SYPP08247 313 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 PRG2P13727 222 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 AGXTP21549 392 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 ATP6V1E1P36543 226 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 CHN2P52757 468 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 RAD23AP54725 363 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 ZNF33BQ06732 778 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 ATP6AP1Q15904 470 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 GXYLT1Q4G148 440 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 ZNF730Q6ZMV8 503 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 ZNF574Q6ZN55 896 aaPredicted RBP9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 BCDIN3DQ7Z5W3 292 aaKnown RBP9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 PTRH1Q86Y79 214 aaKnown RBP9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 MAML2Q8IZL2 1156 aaPredicted RBP9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 TP53INP1Q96A56 240 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 MTERF3Q96E29 417 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 ULBP3Q9BZM4 244 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 AMBRA1Q9C0C7 1298 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 GORASP2Q9H8Y8 452 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 NTN4Q9HB63 628 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 CHD8Q9HCK8 2581 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 TRBV4-1A0A0J9YWV2 114 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 MAGEA13PA6NCF6 341 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 GCM2O75603 506 aaPredicted RBP9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 SP9P0CG40 484 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 FUT1P19526 365 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 ANXA11P50995 505 aaKnown RBP9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 MVDP53602 400 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 PCBP4P57723 403 aaKnown RBP9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 SHBQ15464 509 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 C3orf38Q5JPI3 329 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 B3GLCTQ6Y288 498 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 PEX5LQ8IYB4 626 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 OR56A1Q8NGH5 318 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 GIPC3Q8TF64 312 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 NEURL3Q96EH8 262 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 SELENONQ9NZV5 590 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 NDUFAF4Q9P032 175 aa9.11□□□□□ -0.95
EFCAB13-203ENST00000517484 LNP1A1A4G5 178 aa9.1□□□□□ -0.95
EFCAB13-203ENST00000517484 CDC40O60508 579 aaKnown RBP eCLIP9.1□□□□□ -0.95
EFCAB13-203ENST00000517484 TNFRSF21O75509 655 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms