RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 BTBD9Q96Q07 612 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 ZNF300Q96RE9 604 aaPredicted RBP2.71□□□□□ -1.98
HERC4-215ENST00000515753 S1PR3Q99500 378 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 CCT7Q99832 543 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 CBWD1Q9BRT8 395 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 WRAP53Q9BUR4 548 aaKnown RBP2.71□□□□□ -1.98
HERC4-215ENST00000515753 NUSAP1Q9BXS6 441 aaKnown RBP2.71□□□□□ -1.98
HERC4-215ENST00000515753 MRPL13Q9BYD1 178 aaKnown RBP2.71□□□□□ -1.98
HERC4-215ENST00000515753 PUS3Q9BZE2 481 aaKnown RBP2.71□□□□□ -1.98
HERC4-215ENST00000515753 NCOR1P1Q9H4R4 102 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 WDR76Q9H967 626 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 VIPAS39Q9H9C1 493 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 RAVER2Q9HCJ3 691 aaKnown RBP2.71□□□□□ -1.98
HERC4-215ENST00000515753 PALMDQ9NP74 551 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 HPS4Q9NQG7 708 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 SMPD3Q9NY59 655 aaPredicted RBP2.71□□□□□ -1.98
HERC4-215ENST00000515753 GTSE1Q9NYZ3 720 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 IL36AQ9UHA7 158 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 BCAP29Q9UHQ4 241 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 ATP6V1HQ9UI12 483 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 CHMP2BQ9UQN3 213 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 TNNQ9UQP3 1299 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 PPP2R2CQ9Y2T4 447 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 NSG2Q9Y328 171 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 NFAT5O94916 1531 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 LRRC37A3O60309 1634 aa2.71□□□□□ -1.98
HERC4-215ENST00000515753 TNS1Q9HBL0 1735 aaKnown RBP2.71□□□□□ -1.98
HERC4-215ENST00000515753 RREB1Q92766 1687 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 CCDC162PA2VCL2 907 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 ZSCAN5CA6NGD5 496 aaPredicted RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 MPTX1A8MV57 137 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 LGALS8O00214 317 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 PDXKO00764 312 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 EPHB6O15197 1021 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 GPRIN2O60269 458 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 CPNE6O95741 557 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 EPOP01588 193 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 SLC2A2P11168 524 aaPredicted RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 GP9P14770 177 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 IL4RP24394 825 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 CCNCP24863 283 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 RBMS1P29558 406 aaKnown RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 FCGR2BP31994 310 aaPredicted RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 PRDX2P32119 198 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 ADRA1AP35348 466 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 METAP1P53582 386 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 GEMP55040 296 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 HERV-K104P63124 156 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 MAP2K1Q02750 393 aaPredicted RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 HSPA14Q0VDF9 509 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 SRSF9Q13242 221 aaKnown RBP eCLIP2.7□□□□□ -1.98
HERC4-215ENST00000515753 DRP2Q13474 957 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 ITPK1Q13572 414 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 CDH18Q13634 790 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 DDX39BQ13838 428 aaKnown RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 SQLEQ14534 574 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 EFTUD2Q15029 972 aaKnown RBP eCLIP2.7□□□□□ -1.98
HERC4-215ENST00000515753 SPHARQ15513 63 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 ANKRD55Q3KP44 614 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 POM121L1PQ3SYA9 428 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 CCDC152Q4G0S7 254 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 GLIPR1L2Q4G1C9 344 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 C2CD6Q53TS8 623 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 ZNF542PQ5EBM4 170 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 LCN1P1Q5VSP4 162 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 ZNF776Q68DI1 518 aaPredicted RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 SPINK14Q6IE38 97 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 ZYG11AQ6WRX3 759 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 COX8CQ7Z4L0 72 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 CPEB2Q7Z5Q1 589 aaKnown RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 YRDCQ86U90 279 aaKnown RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 LRRTM1Q86UE6 522 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 VPS36Q86VN1 386 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 CDH26Q8IXH8 852 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 GCNT2Q8N0V5 402 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 SLC43A2Q8N370 569 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 EIF1ADQ8N9N8 165 aaKnown RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 OR6M1Q8NGM8 313 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 MAPK15Q8TD08 544 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 RNF139Q8WU17 664 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 APOBEC4Q8WW27 367 aaKnown RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 CNOT6LQ96LI5 555 aaKnown RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 TTC25Q96NG3 672 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 AGAP3Q96P47 875 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 ZBTB18Q99592 522 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 CDCA3Q99618 268 aaPredicted RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 VGLL1Q99990 258 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 UBAC1Q9BSL1 405 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 POLKQ9UBT6 870 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 C19orf25Q9UFG5 118 aaPredicted RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 PSORS1C1Q9UIG5 152 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 ZNF490Q9ULM2 529 aaPredicted RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 PPP1R3CQ9UQK1 317 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 PHRF1Q9P1Y6 1649 aaKnown RBP2.7□□□□□ -1.98
HERC4-215ENST00000515753 NUP188Q5SRE5 1749 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 ABCA3Q99758 1704 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 PEAK1Q9H792 1746 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 AGRNO00468 2067 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 BRWD3Q6RI45 1802 aa2.7□□□□□ -1.98
HERC4-215ENST00000515753 ABCC4O15439 1325 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms