RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 RNF165Q6ZSG1 346 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 MCEMP1Q8IX19 187 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 SRRM1Q8IYB3 904 aaKnown RBP21.09■□□□□ 0.97
CLDND1-230ENST00000514537 OR7G2Q8NG99 324 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 LILRB4Q8NHJ6 448 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 CDC26Q8NHZ8 85 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 VSTM2LQ96N03 204 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 GNRHR2Q96P88 292 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 FAM111AQ96PZ2 611 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 NODALQ96S42 347 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 SLC17A7Q9P2U7 560 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 PCDHGB3Q9Y5G1 929 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 FAM215AQ9Y5M1 114 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 PTGDR2Q9Y5Y4 395 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 ABCA12Q86UK0 2595 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 LRBAP50851 2863 aa21.09■□□□□ 0.97
CLDND1-230ENST00000514537 WDR1O75083 606 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 UGT2B11O75310 529 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 SEC22BO75396 215 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 HPNP05981 417 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 CT45A8P0DMV1 189 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 CT45A9P0DMV2 189 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 CHRNB4P30926 498 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 PTGDSP41222 190 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 MASP1P48740 699 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 ERCC6LQ2NKX8 1250 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 CT45A2Q5DJT8 189 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 TIGD3Q6B0B8 471 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 SLC30A6Q6NXT4 461 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 B3GNT6Q6ZMB0 384 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 Q6ZSR9 355 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 IKBIPQ70UQ0 350 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 LIX1Q8N485 282 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 TCP10LQ8TDR4 215 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 TTYH2Q9BSA4 534 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 STMN4Q9H169 189 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-230ENST00000514537 TUBB1Q9H4B7 451 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 METTL7AQ9H8H3 244 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 LRTM1Q9HBL6 345 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 MIEF1Q9NQG6 463 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 C1orf109Q9NX04 203 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.08■□□□□ 0.97
CLDND1-230ENST00000514537 C15orf41Q9Y2V0 281 aa21.08■□□□□ 0.97
CLDND1-230ENST00000514537 V9GYY5 206 aaPredicted RBP21.08■□□□□ 0.97
CLDND1-230ENST00000514537 CREBBPQ92793 2442 aa21.08■□□□□ 0.96
CLDND1-230ENST00000514537 CACNA1CQ13936 2221 aa21.08■□□□□ 0.96
CLDND1-230ENST00000514537 APCP25054 2843 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 RGS14O43566 566 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 NPHS1O60500 1241 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 SPAG7O75391 227 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 NME6O75414 186 aaPredicted RBP21.07■□□□□ 0.96
CLDND1-230ENST00000514537 TRAPPC6AO75865 159 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 SNRPB2P08579 225 aaKnown RBP21.07■□□□□ 0.96
CLDND1-230ENST00000514537 FGF4P08620 206 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 HOXD4P09016 255 aaPredicted RBP21.07■□□□□ 0.96
CLDND1-230ENST00000514537 GLI4P10075 376 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 TRPC1P48995 793 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 CDK9P50750 372 aaKnown RBP21.07■□□□□ 0.96
CLDND1-230ENST00000514537 SNTA1Q13424 505 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 KANK2Q63ZY3 851 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 CCDC71Q8IV32 467 aaPredicted RBP21.07■□□□□ 0.96
CLDND1-230ENST00000514537 HOMEZQ8IX15 550 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 OR2T11Q8NH01 316 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 TMBIM1Q969X1 311 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 EGLN2Q96KS0 407 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 TMEM109Q9BVC6 243 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 FOLH1BQ9HBA9 442 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 TAS2R9Q9NYW1 312 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 SENP1Q9P0U3 644 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 DNAJC15Q9Y5T4 150 aa21.07■□□□□ 0.96
CLDND1-230ENST00000514537 A0A087WV62 115 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 OR6C70A6NIJ9 312 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 ICOSLGO75144 302 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 ERN1O75460 977 aaKnown RBP21.06■□□□□ 0.96
CLDND1-230ENST00000514537 SLITRK5O94991 958 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 JUNP05412 331 aaKnown RBP21.06■□□□□ 0.96
CLDND1-230ENST00000514537 GABRA1P14867 456 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 TACR1P25103 407 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 ELAVL4P26378 380 aaKnown RBP21.06■□□□□ 0.96
CLDND1-230ENST00000514537 PTPN6P29350 595 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 NCBP2P52298 156 aaKnown RBP eCLIP21.06■□□□□ 0.96
CLDND1-230ENST00000514537 CORO7P57737 925 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 PSPHP78330 225 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 NPSR1Q6W5P4 371 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 MREGQ8N565 214 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 ACBD4Q8NC06 268 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 SLC35A4Q96G79 324 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 FCRL1Q96LA6 429 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 COL21A1Q96P44 957 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 SPOCK3Q9BQ16 436 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 MECRQ9BV79 373 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 GLIPR2Q9H4G4 154 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 ALKBH4Q9NXW9 302 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 FIS1Q9Y3D6 152 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 FBN2P35556 2912 aa21.06■□□□□ 0.96
CLDND1-230ENST00000514537 PLOD2O00469 737 aa21.05■□□□□ 0.96
CLDND1-230ENST00000514537 GNB5O14775 395 aa21.05■□□□□ 0.96
CLDND1-230ENST00000514537 TSPAN2O60636 221 aa21.05■□□□□ 0.96
CLDND1-230ENST00000514537 REM1O75628 298 aa21.05■□□□□ 0.96
CLDND1-230ENST00000514537 CHRNGP07510 517 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms