RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 MAGEC3Q8TD91 643 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 BLOC1S5Q8TDH9 187 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 TMEM171Q8WVE6 324 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 ASZ1Q8WWH4 475 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 IGFBPL1Q8WX77 278 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 ELMO1Q92556 727 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 SYN2Q92777 582 aaPredicted RBP3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 DAZAP1Q96EP5 407 aaKnown RBP3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 PERPQ96FX8 193 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 OR2A5Q96R48 311 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 OR1F2PQ96R84 312 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 FCRL5Q96RD9 977 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 VAT1Q99536 393 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 CCL19Q99731 98 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 REG4Q9BYZ8 158 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 FAM129AQ9BZQ8 928 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 ATG10Q9H0Y0 220 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 GANQ9H2C0 597 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 CXorf56Q9H5V9 222 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 CXorf36Q9H7Y0 433 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 CLK4Q9HAZ1 481 aaKnown RBP3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 IL1RL2Q9HB29 575 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 ZBTB26Q9HCK0 441 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 ACKR4Q9NPB9 350 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 QPCTLQ9NXS2 382 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 ZNF226Q9NYT6 803 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 SLC39A10Q9ULF5 831 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 MYO6Q9UM54 1294 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 LRCH1Q9Y2L9 728 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 YARS2Q9Y2Z4 477 aaKnown RBP3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 NFS1Q9Y697 457 aa3.34□□□□□ -1.87
PDLIM5-218ENST00000513341 DYSFO75923 2080 aa3.34□□□□□ -1.88
PDLIM5-218ENST00000513341 HEATR5AQ86XA9 2040 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 HEATR5BQ9P2D3 2071 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 KCNE1BA0A087WTH5 132 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 A0A0A6YYC8 382 aaPredicted RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 TRGV5A0A0B4J1U4 118 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 I3L1I5 382 aaPredicted RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 PSMD9O00233 223 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 PES1O00541 588 aaKnown RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 CD3EAPO15446 510 aaKnown RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 CTIFO43310 598 aaKnown RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 KIF5CO60282 957 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 GPC4O75487 556 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 CD48P09326 243 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 OR56A5P0C7T3 313 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 TCF4P15884 667 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 CMPK1P30085 196 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 RFC3P40938 356 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 XCR1P46094 333 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 NR2C2P49116 596 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 CLCN2P51788 898 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 OR4D2P58180 307 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 PLGLB1Q02325 96 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 SLC25A11Q02978 314 aaKnown RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 GBE1Q04446 702 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 PRDX1Q06830 199 aaKnown RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 PKP1Q13835 747 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 SQLEQ14534 574 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 KRT72Q14CN4 511 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 SIX1Q15475 284 aaPredicted RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 PDCD2Q16342 344 aaPredicted RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 TMEM95Q3KNT9 176 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 GRAMD1BQ3KR37 738 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 ZIK1Q3SY52 487 aaPredicted RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 MRNIPQ6NTE8 343 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 NIPAL1Q6NVV3 410 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 SCIMPQ6UWF3 145 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 ZDHHC24Q6UX98 284 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 RANBP10Q6VN20 620 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 LANCL3Q6ZV70 420 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 CAND1Q86VP6 1230 aaKnown RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 SLC26A11Q86WA9 606 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 SERPINA9Q86WD7 417 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 MYLK4Q86YV6 388 aaPredicted RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 DCUN1D3Q8IWE4 304 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 IZUMO1Q8IYV9 350 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 SLC22A15Q8IZD6 547 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 TXLNBQ8N3L3 684 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 CLDN19Q8N6F1 224 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 TMEM251Q8N6I4 163 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 CSNK1A1LQ8N752 337 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 PQLC3Q8N755 202 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 OR2M7Q8NG81 312 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 TMEM255BQ8WV15 326 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 ATG4AQ8WYN0 398 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 ZNF566Q969W8 418 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 RERGQ96A58 199 aaPredicted RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 ZBED6CLQ96FA7 236 aaPredicted RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 TRMT61AQ96FX7 289 aaKnown RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 ZFP3Q96NJ6 502 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 RNF157Q96PX1 679 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 EBNA1BP2Q99848 306 aaKnown RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 FAM173AQ9BQD7 235 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 THAP7Q9BT49 309 aaPredicted RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 SYT11Q9BT88 431 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 DPH7Q9BTV6 452 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 CARD6Q9BX69 1037 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 TSSK1BQ9BXA7 367 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 TTTY12Q9BZ98 90 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms