RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CD8BP10966 210 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 EPB42P16452 691 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 NT5EP21589 574 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 ACVR1BP36896 505 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 PIK3CBP42338 1070 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 DUSP2Q05923 314 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 PLCXD2Q0VAA5 305 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 PPP1R7Q15435 360 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 OR2A2Q6IF42 318 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 AAGABQ6PD74 315 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 SCIMPQ6UWF3 145 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 TRIM58Q8NG06 486 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 OR7G1Q8NGA0 311 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 CAVIN3Q969G5 261 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 PLPPR2Q96GM1 343 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 RNF122Q9H9V4 155 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 PSD3Q9NYI0 1048 aa17.11■□□□□ 0.33
HMGCS1-206ENST00000511774 NDUFS7O75251 213 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 NME6O75414 186 aaPredicted RBP17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 CBX7O95931 251 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 TP53P04637 393 aaPredicted RBP17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 THBS1P07996 1170 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 SOD3P08294 240 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 CPMP14384 443 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 PIK3R1P27986 724 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 FNTAP49354 379 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 XKP51811 444 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 SRSF2Q01130 221 aaKnown RBP17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 DLG1Q12959 904 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 BCL2A1Q16548 175 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 EXOC3L2Q2M3D2 409 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 PRICKLE4Q2TBC4 344 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 CHRFAM7AQ494W8 412 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 CYP20A1Q6UW02 462 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 DNM1P46Q6ZS02 220 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 ZNF662Q6ZS27 426 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 FNDC9Q8TBE3 224 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 RAB3IL1Q8TBN0 382 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 UBTD2Q8WUN7 234 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 AKAP1Q92667 903 aaKnown RBP eCLIP17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 ZBED6CLQ96FA7 236 aaPredicted RBP17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 LCORQ96JN0 433 aaPredicted RBP17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 MAT2BQ9NZL9 334 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 ZNF639Q9UID6 485 aa17.1■□□□□ 0.33
HMGCS1-206ENST00000511774 CXorf49A8MYA2 514 aaPredicted RBP17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 K7EPI3 171 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 TP73O15350 636 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 GPRIN2O60269 458 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 TMCC2O75069 709 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 CDKN1AP38936 164 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 NEK2P51955 445 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 ARFIP1P53367 373 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 GAS1P54826 345 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 POU4F1Q01851 419 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 STAC2Q6ZMT1 411 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 PDIK1LQ8N165 341 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 OR4K14Q8NGD5 310 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 GRK7Q8WTQ7 553 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 RNF138Q8WVD3 245 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 TMBIM1Q969X1 311 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 UBXN10Q96LJ8 280 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 PINK1Q9BXM7 581 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 SLCO5A1Q9H2Y9 848 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 ALG9Q9H6U8 611 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 WDR41Q9HAD4 459 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 DKKL1Q9UK85 242 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 PLLPQ9Y342 182 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 MRPS18CQ9Y3D5 142 aaKnown RBP17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 TSC22D4Q9Y3Q8 395 aa17.09■□□□□ 0.33
HMGCS1-206ENST00000511774 A8MV72 311 aaPredicted RBP17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 UBXN8O00124 270 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 AQP8O94778 261 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 IGHV4-39P01824 125 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 PTX3P26022 381 aaPredicted RBP17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 DPP4P27487 766 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 CLDN20P56880 219 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 ATP6V0D1P61421 351 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 RPS4XP62701 263 aaKnown RBP17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 MYLK4Q86YV6 388 aaPredicted RBP17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 WFDC8Q8IUA0 241 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 ADCY4Q8NFM4 1077 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 NEUROG1Q92886 237 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 ATOH8Q96SQ7 321 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 CENPKQ9BS16 269 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 DDX47Q9H0S4 455 aaKnown RBP17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 OPTCQ9UBM4 332 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 BCAP29Q9UHQ4 241 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 CES1P1Q9UKY3 287 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 PROCRQ9UNN8 238 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 FREM1Q5H8C1 2179 aa17.08■□□□□ 0.32
HMGCS1-206ENST00000511774 MALRD1Q5VYJ5 2156 aa17.07■□□□□ 0.32
HMGCS1-206ENST00000511774 A0A096LNT2 108 aa17.07■□□□□ 0.32
HMGCS1-206ENST00000511774 EFCAB8A8MWE9 144 aa17.07■□□□□ 0.32
HMGCS1-206ENST00000511774 PGRMC1O00264 195 aaKnown RBP17.07■□□□□ 0.32
HMGCS1-206ENST00000511774 ACOX3O15254 700 aa17.07■□□□□ 0.32
HMGCS1-206ENST00000511774 WIPF1O43516 503 aa17.07■□□□□ 0.32
HMGCS1-206ENST00000511774 ADAM11O75078 769 aa17.07■□□□□ 0.32
HMGCS1-206ENST00000511774 DANCRP0C864 163 aa17.07■□□□□ 0.32
HMGCS1-206ENST00000511774 FAM157CP0CG43 387 aa17.07■□□□□ 0.32
HMGCS1-206ENST00000511774 PORP16435 677 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms