RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 DDX18Q9NVP1 670 aaKnown RBP12.84□□□□□ -0.35
DDX41-212ENST00000511040 CNIH4Q9P003 139 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 ATP6V1HQ9UI12 483 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 HAO1Q9UJM8 370 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 EIF3LQ9Y262 564 aaKnown RBP12.84□□□□□ -0.35
DDX41-212ENST00000511040 HIVEP3Q5T1R4 2406 aa12.84□□□□□ -0.35
DDX41-212ENST00000511040 POLEQ07864 2286 aa12.83□□□□□ -0.35
DDX41-212ENST00000511040 A0A087WV62 115 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 A0A1B0GTH9 108 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 ACOT7O00154 380 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 PLOD2O00469 737 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 ACOX3O15254 700 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 SLC19A2O60779 497 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 TBX19O60806 448 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 COQ9O75208 318 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 SNNO75324 88 aaPredicted RBP12.83□□□□□ -0.36
DDX41-212ENST00000511040 REM1O75628 298 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 PPM1BO75688 479 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 SNUPNO95149 360 aaKnown RBP12.83□□□□□ -0.36
DDX41-212ENST00000511040 CELA3AP09093 270 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 RFPL3SP0C7P2 107 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 CT45A8P0DMV1 189 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 CT45A9P0DMV2 189 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 LAMP1P11279 417 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 PRPS2P11908 318 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 MAGEA5P43359 124 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 TMED10P49755 219 aaKnown RBP12.83□□□□□ -0.36
DDX41-212ENST00000511040 MANFP55145 182 aaKnown RBP12.83□□□□□ -0.36
DDX41-212ENST00000511040 DCAF7P61962 342 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 EMX2Q04743 252 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 C3AR1Q16581 482 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 CT45A2Q5DJT8 189 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 SZRD1Q7Z422 152 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 R3HCC1LQ7Z5L2 792 aaKnown RBP12.83□□□□□ -0.36
DDX41-212ENST00000511040 SLC22A16Q86VW1 577 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 CHERPQ8IWX8 916 aaKnown RBP12.83□□□□□ -0.36
DDX41-212ENST00000511040 SLC34A3Q8N130 599 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 OR2L13Q8N349 312 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 ZFP28Q8NHY6 868 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 SSC4DQ8WTU2 575 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 ZBED6CLQ96FA7 236 aaPredicted RBP12.83□□□□□ -0.36
DDX41-212ENST00000511040 ZNF764Q96H86 408 aaPredicted RBP12.83□□□□□ -0.36
DDX41-212ENST00000511040 NODALQ96S42 347 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 DOHHQ9BU89 302 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 MANSC1Q9H8J5 431 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 EQTNQ9NQ60 294 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 THAP1Q9NVV9 213 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 TAS2R9Q9NYW1 312 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 TINAGQ9UJW2 476 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 C19orf53Q9UNZ5 99 aaPredicted RBP12.83□□□□□ -0.36
DDX41-212ENST00000511040 LIPGQ9Y5X9 500 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 NINQ8N4C6 2090 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 DOPEY2Q9Y3R5 2298 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 EXPH5Q8NEV8 1989 aa12.83□□□□□ -0.36
DDX41-212ENST00000511040 C2orf72A6NCS6 295 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 LRRC3CA6NJW4 275 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 TO15178 435 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 UGT2B11O75310 529 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 ABOP16442 354 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 PRKAG1P54619 331 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 DIO3P55073 304 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 PGS1Q32NB8 556 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 CPTPQ5TA50 214 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 ATG16L1Q676U5 607 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 SPPL2CQ8IUH8 684 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 TRIM42Q8IWZ5 723 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 GOLGA6L1Q8N7Z2 621 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 HGDQ93099 445 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 MTERF3Q96E29 417 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 RILPQ96NA2 401 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 ADOQ96SZ5 270 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 SH3GL2Q99962 352 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 METTL7AQ9H8H3 244 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 MEAF6Q9HAF1 191 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 NOP53Q9NZM5 478 aaKnown RBP12.82□□□□□ -0.36
DDX41-212ENST00000511040 BOKQ9UMX3 212 aaPredicted RBP12.82□□□□□ -0.36
DDX41-212ENST00000511040 OR10H1Q9Y4A9 318 aa12.82□□□□□ -0.36
DDX41-212ENST00000511040 GOLGA8QA0A0J9YX86 632 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 A0A1B0GUH1 482 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 A1L4Q6 167 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 GOLGA8OA6NCC3 632 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 GOLGA8NF8WBI6 632 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 CCL21O00585 134 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 SDHDO14521 159 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 SASH3O75995 380 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 SLITRK5O94991 958 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 PSMG1O95456 288 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 LDLRP01130 860 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 NAGAP17050 411 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 LBPP18428 481 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 PRPS1L1P21108 318 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 RPL3P39023 403 aaKnown RBP12.81□□□□□ -0.36
DDX41-212ENST00000511040 CASP3P42574 277 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 FRKP42685 505 aaPredicted RBP12.81□□□□□ -0.36
DDX41-212ENST00000511040 CA7P43166 264 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 MASP1P48740 699 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 CASP6P55212 293 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 RPP38P78345 283 aaKnown RBP12.81□□□□□ -0.36
DDX41-212ENST00000511040 OCRLQ01968 901 aa12.81□□□□□ -0.36
DDX41-212ENST00000511040 MAD2L1Q13257 205 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms