RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 DLX3O60479 287 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 UGT2B11O75310 529 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 CBR3O75828 277 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 ACTL6AO96019 429 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 IL3P08700 152 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 CYP4B1P13584 511 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 DRD2P14416 443 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 CHN1P15882 459 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 IMPDH1P20839 514 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 ATP5F1P24539 256 aaPredicted RBP14.03□□□□□ -0.16
TPM3-219ENST00000509409 CTSSP25774 331 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 KRT20P35900 424 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 EMDP50402 254 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 ZNF136P52737 540 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 IST1P53990 364 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 SRYQ05066 204 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 ERCC6LQ2NKX8 1250 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 DCST1Q5T197 706 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 SLC22A9Q8IVM8 553 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 GBP7Q8N8V2 638 aaPredicted RBP14.03□□□□□ -0.16
TPM3-219ENST00000509409 FAM222BQ8WU58 562 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 KAT2AQ92830 837 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 TMBIM1Q969X1 311 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 CTHRC1Q96CG8 243 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 COL21A1Q96P44 957 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 ZNF382Q96SR6 550 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 CLEC4MQ9H2X3 399 aaPredicted RBP14.03□□□□□ -0.16
TPM3-219ENST00000509409 FOXD3Q9UJU5 478 aaPredicted RBP14.03□□□□□ -0.16
TPM3-219ENST00000509409 NFU1Q9UMS0 254 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 EDARQ9UNE0 448 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 EXO1Q9UQ84 846 aaKnown RBP14.03□□□□□ -0.16
TPM3-219ENST00000509409 SPG11Q96JI7 2443 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 HIVEP1P15822 2718 aa14.03□□□□□ -0.16
TPM3-219ENST00000509409 CCDC151A5D8V7 595 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 FRG2CA6NGY1 282 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 EEF1E1-BLOC1S5C9J1V9 151 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 GOLGA8RI6L899 631 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 EEF1E1O43324 174 aaKnown RBP14.02□□□□□ -0.17
TPM3-219ENST00000509409 RHOXF2BP0C7M4 288 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 OPRM1P35372 400 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 PTGDSP41222 190 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 DGKQP52824 942 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 HMGCS1Q01581 520 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 ACSM2AQ08AH3 577 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 HEPACAMQ14CZ8 416 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 FLYWCH1Q4VC44 716 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 SPDYAQ5MJ70 313 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 ACSM2BQ68CK6 577 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 TMEM81Q6P7N7 255 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 SCIMPQ6UWF3 145 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 ENPP6Q6UWR7 440 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 KIF18BQ86Y91 864 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 SAMD14Q8IZD0 417 aaPredicted RBP14.02□□□□□ -0.17
TPM3-219ENST00000509409 OR9A2Q8NGT5 310 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 ZPLD1Q8TCW7 415 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 C16orf78Q8WTQ4 265 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 APIPQ96GX9 242 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 TMEM237Q96Q45 408 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 BBS4Q96RK4 519 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 ADOQ96SZ5 270 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 SH3GL2Q99962 352 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 ANKRA2Q9H9E1 313 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 RASSF1Q9NS23 344 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 CCM2LQ9NUG4 571 aaPredicted RBP14.02□□□□□ -0.17
TPM3-219ENST00000509409 SENP1Q9P0U3 644 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 FETUBQ9UGM5 382 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 STK38LQ9Y2H1 464 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 GPR55Q9Y2T6 319 aaPredicted RBP14.02□□□□□ -0.17
TPM3-219ENST00000509409 TIMM22Q9Y584 194 aa14.02□□□□□ -0.17
TPM3-219ENST00000509409 ANKRD17O75179 2603 aaKnown RBP14.02□□□□□ -0.17
TPM3-219ENST00000509409 TUBAL3A6NHL2 446 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 OR6C70A6NIJ9 312 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 A6NNC1 897 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 H0Y3Z8 333 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 TO15178 435 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 ABHD2P08910 425 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 TMIGD3P0DMS9 266 aaPredicted RBP14.01□□□□□ -0.17
TPM3-219ENST00000509409 TACR1P25103 407 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 GCAP28676 217 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 IL12BP29460 328 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 MPIP34949 423 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 SOX18P35713 384 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 PRKAA2P54646 552 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 RAE1P78406 368 aaKnown RBP14.01□□□□□ -0.17
TPM3-219ENST00000509409 SPIN4Q56A73 249 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 ZNF628Q5EBL2 1059 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 LARP4Q71RC2 724 aaKnown RBP eCLIP14.01□□□□□ -0.171e-8■□□□□ 9.3
TPM3-219ENST00000509409 TRMT10CQ7L0Y3 403 aaKnown RBP14.01□□□□□ -0.17
TPM3-219ENST00000509409 LCA5Q86VQ0 697 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 PLCZ1Q86YW0 608 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 TRIM42Q8IWZ5 723 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 IFT20Q8IY31 132 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 CCNYL1Q8N7R7 359 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 C9orf106Q8NAJ2 232 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 CDC26Q8NHZ8 85 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 ZNF675Q8TD23 568 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 NTNG2Q96CW9 530 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 DTNBP1Q96EV8 351 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 RMND5BQ96G75 393 aaPredicted RBP14.01□□□□□ -0.17
TPM3-219ENST00000509409 EBPLQ9BY08 206 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms