RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 CPA2P48052 419 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 SERPINB9P50453 376 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 ETF1P62495 437 aaKnown RBP13.25□□□□□ -0.29
SEC24D-208ENST00000506622 DEFB113Q30KQ7 82 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 TRMT12Q53H54 448 aaKnown RBP13.25□□□□□ -0.29
SEC24D-208ENST00000506622 SCIMPQ6UWF3 145 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 SYT10Q6XYQ8 523 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 IFNEQ86WN2 208 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 TRIM42Q8IWZ5 723 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 OR52R1Q8NGF1 315 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 RDH11Q8TC12 318 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 SLC44A1Q8WWI5 657 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 CTHRC1Q96CG8 243 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 TMCO6Q96DC7 493 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 MRPL57Q9BQC6 102 aaKnown RBP13.25□□□□□ -0.29
SEC24D-208ENST00000506622 TUBA1CQ9BQE3 449 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 SFXN3Q9BWM7 321 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 RBM24Q9BX46 236 aaKnown RBP13.25□□□□□ -0.29
SEC24D-208ENST00000506622 PFDN4Q9NQP4 134 aa13.25□□□□□ -0.29
SEC24D-208ENST00000506622 CLCA1A8K7I4 914 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 REM1O75628 298 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 BCAS2O75934 225 aaPredicted RBP13.24□□□□□ -0.29
SEC24D-208ENST00000506622 RCBTB2O95199 551 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 ATE1O95260 518 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 CBX7O95931 251 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 PTGDSP41222 190 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 MAGEA12P43365 314 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 SLCO1A2P46721 670 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 CDH13P55290 713 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 TRA2BP62995 288 aaKnown RBP13.24□□□□□ -0.29
SEC24D-208ENST00000506622 CKAP4Q07065 602 aaKnown RBP13.24□□□□□ -0.29
SEC24D-208ENST00000506622 GALNT1Q10472 559 aaPredicted RBP13.24□□□□□ -0.29
SEC24D-208ENST00000506622 FOXF2Q12947 444 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 AAGABQ6PD74 315 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 ZNF572Q7Z3I7 529 aaPredicted RBP13.24□□□□□ -0.29
SEC24D-208ENST00000506622 LUZP2Q86TE4 346 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 MMP21Q8N119 569 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 WDSUB1Q8N9V3 476 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 SIMC1Q8NDZ2 872 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 WNT2BQ93097 391 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 TMBIM1Q969X1 311 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 ISL2Q96A47 359 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 INTS12Q96CB8 462 aaKnown RBP13.24□□□□□ -0.29
SEC24D-208ENST00000506622 DACH2Q96NX9 599 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 COL21A1Q96P44 957 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 LRRC1Q9BTT6 524 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 OR2B2Q9GZK3 357 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 TSPYL1Q9H0U9 437 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 MRPL46Q9H2W6 279 aaKnown RBP13.24□□□□□ -0.29
SEC24D-208ENST00000506622 ACBD3Q9H3P7 528 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 TAS2R10Q9NYW0 307 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 VPS29Q9UBQ0 182 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 UTS2RQ9UKP6 389 aa13.24□□□□□ -0.29
SEC24D-208ENST00000506622 FRG2CA6NGY1 282 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 OR6C70A6NIJ9 312 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 PPP6CO00743 305 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 CASKO14936 926 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 TO15178 435 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 ABCB7O75027 752 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 RPS17P08708 135 aaKnown RBP13.23□□□□□ -0.29
SEC24D-208ENST00000506622 PCSK2P16519 638 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 HOXB4P17483 251 aaPredicted RBP13.23□□□□□ -0.29
SEC24D-208ENST00000506622 TSPAN8P19075 237 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 SOX18P35713 384 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 KRT20P35900 424 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 EMDP50402 254 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 EEF1A1P68104 462 aaKnown RBP13.23□□□□□ -0.29
SEC24D-208ENST00000506622 MRPS35P82673 323 aaKnown RBP13.23□□□□□ -0.29
SEC24D-208ENST00000506622 HMGCS1Q01581 520 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 GAB1Q13480 694 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 LTB4RQ15722 352 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 EEF1A1P5Q5VTE0 462 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 FAM180BQ6P0A1 224 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 LETMD1Q6P1Q0 360 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 RPS27LQ71UM5 84 aaKnown RBP13.23□□□□□ -0.29
SEC24D-208ENST00000506622 PLCZ1Q86YW0 608 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 RELL1Q8IUW5 271 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 CCDC116Q8IYX3 515 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 C1orf52Q8N6N3 182 aaKnown RBP13.23□□□□□ -0.29
SEC24D-208ENST00000506622 ZNF483Q8TF39 744 aaPredicted RBP13.23□□□□□ -0.29
SEC24D-208ENST00000506622 CNRIP1Q96F85 164 aaPredicted RBP13.23□□□□□ -0.29
SEC24D-208ENST00000506622 ZNF681Q96N22 645 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 PAFAH2Q99487 392 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 FUT8Q9BYC5 575 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 GSX1Q9H4S2 264 aaPredicted RBP13.23□□□□□ -0.29
SEC24D-208ENST00000506622 PLEKHF2Q9H8W4 249 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 NEUROD4Q9HD90 331 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 DLL4Q9NR61 685 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 GALNT8Q9NY28 637 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 TRPS1Q9UHF7 1281 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 GPR55Q9Y2T6 319 aaPredicted RBP13.23□□□□□ -0.29
SEC24D-208ENST00000506622 TLN2Q9Y4G6 2542 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 JMJD1CQ15652 2540 aa13.23□□□□□ -0.29
SEC24D-208ENST00000506622 A0A1B0GTL3 188 aa13.22□□□□□ -0.29
SEC24D-208ENST00000506622 SH3D21A4FU49 640 aa13.22□□□□□ -0.29
SEC24D-208ENST00000506622 POC1B-GALNT4F8VUJ3 575 aa13.22□□□□□ -0.29
SEC24D-208ENST00000506622 KRT6AP02538 564 aa13.22□□□□□ -0.29
SEC24D-208ENST00000506622 KRT6BP04259 564 aa13.22□□□□□ -0.29
SEC24D-208ENST00000506622 CHMP24386 653 aa13.22□□□□□ -0.29
SEC24D-208ENST00000506622 SRD5A2P31213 254 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms