RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SPATA19Q7Z5L4 167 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.71□□□□□ -1.34
GYPB-206ENST00000506516 WDR75Q8IWA0 830 aaKnown RBP6.71□□□□□ -1.34
GYPB-206ENST00000506516 GOLM1Q8NBJ4 401 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 POGLUT1Q8NBL1 392 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 OR9A2Q8NGT5 310 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 CEP70Q8NHQ1 597 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 CLHC1Q8NHS4 586 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 GRHL3Q8TE85 626 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 KAT2AQ92830 837 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 ADIPOR1Q96A54 375 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 ELP4Q96EB1 424 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 HSPBAP1Q96EW2 488 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 LCORQ96JN0 433 aaPredicted RBP6.71□□□□□ -1.34
GYPB-206ENST00000506516 FRMD6Q96NE9 622 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 AMDHD1Q96NU7 426 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 BARD1Q99728 777 aaKnown RBP6.71□□□□□ -1.34
GYPB-206ENST00000506516 C1orf50Q9BV19 199 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 DPY30Q9C005 99 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 GLIPR2Q9H4G4 154 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 MEAF6Q9HAF1 191 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 C3orf14Q9HBI5 128 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 ACSS1Q9NUB1 689 aaPredicted RBP6.71□□□□□ -1.34
GYPB-206ENST00000506516 OLAHQ9NV23 265 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 ASIC5Q9NY37 505 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 GIMAP2Q9UG22 337 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 ATP6V1HQ9UI12 483 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 GDF2Q9UK05 429 aaPredicted RBP6.71□□□□□ -1.34
GYPB-206ENST00000506516 NPFFR2Q9Y5X5 522 aa6.71□□□□□ -1.34
GYPB-206ENST00000506516 MED13Q9UHV7 2174 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 A0A1W2PRB8 838 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 ADARB2-AS1A8MUL3 147 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 J3QW42 95 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 SCAMP2O15127 329 aaKnown RBP6.7□□□□□ -1.34
GYPB-206ENST00000506516 ACOX3O15254 700 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 ATP8B1O43520 1251 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 TGDSO95455 350 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 CBX7O95931 251 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 GHRHP01286 108 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 IFI6P09912 130 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 GPX3P22352 226 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 PTGER1P34995 402 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 KRT20P35900 424 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 ADH7P40394 386 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 OCRLQ01968 901 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 PDE7AQ13946 482 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 PTGR1Q14914 329 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 MLC1Q15049 377 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 RPS6KA2Q15349 733 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 ZNHIT3Q15649 155 aaPredicted RBP6.7□□□□□ -1.34
GYPB-206ENST00000506516 PRSS53Q2L4Q9 553 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 ZNF791Q3KP31 576 aaPredicted RBP6.7□□□□□ -1.34
GYPB-206ENST00000506516 LSM12Q3MHD2 195 aaKnown RBP6.7□□□□□ -1.34
GYPB-206ENST00000506516 KRTCAP3Q53RY4 240 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 PRR30Q53SZ7 412 aaPredicted RBP6.7□□□□□ -1.34
GYPB-206ENST00000506516 ANKRD26P1Q6NSI1 321 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 TMEM107Q6UX40 140 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 RGS9BPQ6ZS82 235 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 LARP4Q71RC2 724 aaKnown RBP eCLIP6.7□□□□□ -1.34
GYPB-206ENST00000506516 NUP54Q7Z3B4 507 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 MDGA2Q7Z553 956 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 ZNF227Q86WZ6 799 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 SULF2Q8IWU5 870 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 ARFGAP2Q8N6H7 521 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 ZNF441Q8N8Z8 693 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 ST6GALNAC3Q8NDV1 305 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 PSD4Q8NDX1 1056 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 FAM13CQ8NE31 585 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 VPS37AQ8NEZ2 397 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 NR4A3Q92570 626 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 COQ8BQ96D53 544 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 SPACA9Q96E40 222 aaPredicted RBP6.7□□□□□ -1.34
GYPB-206ENST00000506516 MAGED4Q96JG8 741 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 MAGEB18Q96M61 343 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 C7orf26Q96N11 449 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 TAAR6Q96RI8 345 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 SECISBP2Q96T21 854 aaKnown RBP6.7□□□□□ -1.34
GYPB-206ENST00000506516 FAM173AQ9BQD7 235 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 HES7Q9BYE0 225 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 BHLHE41Q9C0J9 482 aaPredicted RBP6.7□□□□□ -1.34
GYPB-206ENST00000506516 SACM1LQ9NTJ5 587 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 DDX18Q9NVP1 670 aaKnown RBP6.7□□□□□ -1.34
GYPB-206ENST00000506516 CNIH4Q9P003 139 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 MARCOQ9UEW3 520 aaPredicted RBP6.7□□□□□ -1.34
GYPB-206ENST00000506516 C19orf53Q9UNZ5 99 aaPredicted RBP6.7□□□□□ -1.34
GYPB-206ENST00000506516 NTNG1Q9Y2I2 539 aa6.7□□□□□ -1.34
GYPB-206ENST00000506516 SPENQ96T58 3664 aaKnown RBP6.7□□□□□ -1.34
GYPB-206ENST00000506516 TNRC6AQ8NDV7 1962 aaKnown RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 ASPDHA6ND91 283 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ANKUB1A6NFN9 424 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 FRG2CA6NGY1 282 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 TTC36A6NLP5 189 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ACOT7O00154 380 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 UPK1AO00322 258 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 SDHDO14521 159 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 CFLARO15519 480 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 ZNF354AO60765 605 aaPredicted RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 ERN1O75460 977 aaKnown RBP6.69□□□□□ -1.34
GYPB-206ENST00000506516 SOX30O94993 753 aa6.69□□□□□ -1.34
GYPB-206ENST00000506516 CBX6O95503 412 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms