RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 FAM166BA8MTA8 275 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 SDHDO14521 159 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 P04436 131 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 RFPL3SP0C7P2 107 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 KITP10721 976 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 MAPK1P28482 360 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 PSG6Q00889 435 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 KRTCAP3Q53RY4 240 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 MAVSQ7Z434 540 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 WDR75Q8IWA0 830 aaKnown RBP16.38■□□□□ 0.21
SMN1-204ENST00000506163 RAB3IL1Q8TBN0 382 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 SPPL2AQ8TCT8 520 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 HGDQ93099 445 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 COQ8BQ96D53 544 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 MTERF3Q96E29 417 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 HSPBAP1Q96EW2 488 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 NCKAP5O14513 1909 aa16.38■□□□□ 0.21
SMN1-204ENST00000506163 FLNBO75369 2602 aaKnown RBP16.38■□□□□ 0.21
SMN1-204ENST00000506163 LRRC3CA6NJW4 275 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 ZNF195O14628 629 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 KLF11O14901 512 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 ACOX3O15254 700 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 UGT2B11O75310 529 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 ERN1O75460 977 aaKnown RBP16.37■□□□□ 0.21
SMN1-204ENST00000506163 PPM1BO75688 479 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 STSP08842 583 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 MANFP55145 182 aaKnown RBP16.37■□□□□ 0.21
SMN1-204ENST00000506163 CLDN8P56748 225 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 NRG3P56975 720 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 DCAF7P61962 342 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 PPIAP62937 165 aaKnown RBP16.37■□□□□ 0.21
SMN1-204ENST00000506163 RPS6KA2Q15349 733 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 SMU1Q2TAY7 513 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 ATG16L1Q676U5 607 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 R3HCC1LQ7Z5L2 792 aaKnown RBP16.37■□□□□ 0.21
SMN1-204ENST00000506163 DND1Q8IYX4 353 aaKnown RBP16.37■□□□□ 0.21
SMN1-204ENST00000506163 TMEM251Q8N6I4 163 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 TMBIM1Q969X1 311 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 NODALQ96S42 347 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 DEFB127Q9H1M4 99 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 WDR55Q9H6Y2 383 aaPredicted RBP16.37■□□□□ 0.21
SMN1-204ENST00000506163 SIRT3Q9NTG7 399 aaPredicted RBP16.37■□□□□ 0.21
SMN1-204ENST00000506163 ACSS1Q9NUB1 689 aaPredicted RBP16.37■□□□□ 0.21
SMN1-204ENST00000506163 NOP53Q9NZM5 478 aaKnown RBP16.37■□□□□ 0.21
SMN1-204ENST00000506163 CNIH4Q9P003 139 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 NTMQ9P121 344 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 EIF3LQ9Y262 564 aaKnown RBP16.37■□□□□ 0.21
SMN1-204ENST00000506163 PTPN13Q12923 2485 aa16.37■□□□□ 0.21
SMN1-204ENST00000506163 USP9YO00507 2555 aaPredicted RBP16.37■□□□□ 0.21
SMN1-204ENST00000506163 TFECO14948 347 aaPredicted RBP16.36■□□□□ 0.21
SMN1-204ENST00000506163 ANKRD28O15084 1053 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 PDE9AO76083 593 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 SLITRK5O94991 958 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 CELA3AP09093 270 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 ALDOCP09972 364 aaKnown RBP16.36■□□□□ 0.21
SMN1-204ENST00000506163 NAGAP17050 411 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 PTGDSP41222 190 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 C21orf58P58505 322 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 CPTPQ5TA50 214 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 FNDC7Q5VTL7 733 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 SLC44A2Q8IWA5 706 aaPredicted RBP16.36■□□□□ 0.21
SMN1-204ENST00000506163 DIO2Q92813 273 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 ZBED6CLQ96FA7 236 aaPredicted RBP16.36■□□□□ 0.21
SMN1-204ENST00000506163 ZDHHC11Q9H8X9 412 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 IL1RL2Q9HB29 575 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 RYDENQ9NUL5 291 aaKnown RBP16.36■□□□□ 0.21
SMN1-204ENST00000506163 DDX18Q9NVP1 670 aaKnown RBP16.36■□□□□ 0.21
SMN1-204ENST00000506163 TAS2R9Q9NYW1 312 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 ZNF835Q9Y2P0 537 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.36■□□□□ 0.21
SMN1-204ENST00000506163 FREM3P0C091 2139 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 ICE1Q9Y2F5 2266 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 PCNX1Q96RV3 2341 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 SPTAN1Q13813 2472 aaKnown RBP16.36■□□□□ 0.21
SMN1-204ENST00000506163 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 ANKRD33BA6NCL7 494 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 WIPF3A6NGB9 483 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 HMGB1P1B2RPK0 211 aaPredicted RBP16.36■□□□□ 0.21
SMN1-204ENST00000506163 HDAC3O15379 428 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 LRRTM2O43300 516 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 TRIM3O75382 744 aaPredicted RBP16.36■□□□□ 0.21
SMN1-204ENST00000506163 IFI6P09912 130 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 LBPP18428 481 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 PRPS1L1P21108 318 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 EPHA3P29320 983 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 HPCAL1P37235 193 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 MAP3K8P41279 467 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 CASP3P42574 277 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 WNT3P56703 355 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 PHC1P78364 1004 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 PLGLB1Q02325 96 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 PLCXD2Q0VAA5 305 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 GAB1Q13480 694 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 HYAL4Q2M3T9 481 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 C1QL3Q5VWW1 255 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 GK5Q6ZS86 529 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 TRIM42Q8IWZ5 723 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 KIRREL3Q8IZU9 778 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 SLC34A3Q8N130 599 aa16.36■□□□□ 0.21
SMN1-204ENST00000506163 HOXB13Q92826 284 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms