RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 OR6C70A6NIJ9 312 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 SMPD2O60906 423 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 REM1O75628 298 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 INHBAP08476 426 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 CT62P0C5K7 136 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 CPOXP36551 454 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 ALDH9A1P49189 494 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 PCYT1AP49585 367 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 IRF9Q00978 393 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 NNATQ16517 81 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 PRICKLE4Q2TBC4 344 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 CLEC9AQ6UXN8 241 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 TRIM42Q8IWZ5 723 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 C9orf106Q8NAJ2 232 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 SELENOMQ8WWX9 145 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 MRRFQ96E11 262 aaKnown RBP19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 PHF21BQ96EK2 531 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 TUBA1CQ9BQE3 449 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 ITPAQ9BY32 194 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 HHATLQ9HCP6 504 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 FANCFQ9NPI8 374 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 SDHAF3Q9NRP4 125 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 STOML1Q9UBI4 398 aa19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 MRPS18CQ9Y3D5 142 aaKnown RBP19.14■□□□□ 0.65
SQSTM1-210ENST00000506042 WASHC1A8K0Z3 465 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 MSTNO14793 375 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 SIX3O95343 332 aaPredicted RBP19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 HRGP04196 525 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 COL6A2P12110 1019 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 HOXC12P31275 282 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 SERPINB9P50453 376 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 COMMD6Q7Z4G1 85 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 LRRC75A-AS1Q8N1F1 130 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 MEIOBQ8N635 442 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 CDK15Q96Q40 435 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 PIP5K1AQ99755 562 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 BDH2Q9BUT1 245 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 GRPEL1Q9HAV7 217 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 MAT2BQ9NZL9 334 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 WIF1Q9Y5W5 379 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 EXPH5Q8NEV8 1989 aa19.13■□□□□ 0.65
SQSTM1-210ENST00000506042 CCDC151A5D8V7 595 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 LINC01387J3KSC0 135 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 TO15178 435 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 HSD3B1P14060 373 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 HSD3B2P26439 372 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 CNTFP26441 200 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 FEN1P39748 380 aaKnown RBP19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 CLK3P49761 638 aaKnown RBP19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 BCL2A1Q16548 175 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 SGO1Q5FBB7 561 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 TECRLQ5HYJ1 363 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 DCST1Q5T197 706 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 WFDC11Q8NEX6 87 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 OR4K17Q8NGC6 315 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 OR52R1Q8NGF1 315 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 RDH11Q8TC12 318 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 HGDQ93099 445 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 FAM111AQ96PZ2 611 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 GSX1Q9H4S2 264 aaPredicted RBP19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 MRTO4Q9UKD2 239 aaKnown RBP19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 STK38LQ9Y2H1 464 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 PLLPQ9Y342 182 aa19.12■□□□□ 0.65
SQSTM1-210ENST00000506042 OR7A17O14581 309 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 SMNDC1O75940 238 aaKnown RBP eCLIP19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 KRT6AP02538 564 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 ALDOAP04075 364 aaKnown RBP19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 KRT6BP04259 564 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 PEPDP12955 493 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 GMPRP36959 345 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 KRT6CP48668 564 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 MRPS25P82663 173 aaKnown RBP19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 C2orf54Q08AI8 447 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 EXOSC7Q15024 291 aaKnown RBP19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 POU4F3Q15319 338 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 OR52B6Q8NGF0 335 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 DOCK7Q96N67 2140 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 NODALQ96S42 347 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 MED18Q9BUE0 208 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 STMN4Q9H169 189 aaPredicted RBP19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 KCNF1Q9H3M0 494 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 PTGES2Q9H7Z7 377 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 GALNT9Q9HCQ5 603 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 TAS2R9Q9NYW1 312 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 PCTPQ9UKL6 214 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 UTS2RQ9UKP6 389 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 OR10H1Q9Y4A9 318 aa19.11■□□□□ 0.65
SQSTM1-210ENST00000506042 LRRC14BA6NHZ5 514 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 A8MXE2 369 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 KDM4EB2RXH2 506 aaPredicted RBP19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 PLOD2O00469 737 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 UGT2B11O75310 529 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 HEXAP06865 529 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 CD53P19397 219 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 CASQ1P31415 396 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 GSTM5P46439 218 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 HMGCS1Q01581 520 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 HEPACAMQ14CZ8 416 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 GCNT2Q8N0V5 402 aa19.1■□□□□ 0.65
SQSTM1-210ENST00000506042 CNPY4Q8N129 248 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms