RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 JRKO75564 520 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 SMNDC1O75940 238 aaKnown RBP eCLIP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 MED26O95402 600 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 H6PDO95479 791 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 LGI1O95970 557 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 AK1P00568 194 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 CTSBP07858 339 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 CHRM4P08173 479 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 ALOX5P09917 674 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 ITGAMP11215 1152 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 NELFEP18615 380 aaKnown RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 GALNSP34059 522 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 DAPP51397 102 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 HSD17B7P56937 341 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 SPIBQ01892 262 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 ID2Q02363 134 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 MGAT2Q10469 447 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 PPP1R8Q12972 351 aaKnown RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 KCNAB2Q13303 367 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 CLPPQ16740 277 aaPredicted RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 PRICKLE4Q2TBC4 344 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 HLA-BQ31612 363 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 ARHGAP11BQ3KRB8 267 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 ZIK1Q3SY52 487 aaPredicted RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 AMZ1Q400G9 498 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 GPAT3Q53EU6 434 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 TRMT12Q53H54 448 aaKnown RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 AP1ARQ63HQ0 302 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 MFSD12Q6NUT3 480 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 FAHD1Q6P587 224 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 TMEM71Q6P5X7 295 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 TTC33Q6PID6 262 aaPredicted RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 DHRS4L2Q6PKH6 230 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 C16orf62Q7Z3J2 963 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 ZNF605Q86T29 641 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 CYP4Z1Q86W10 505 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 Q8N9G6 341 aaPredicted RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 CDRT4Q8N9R6 151 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 SMYD1Q8NB12 490 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 CHDHQ8NE62 594 aaPredicted RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 PIK3C3Q8NEB9 887 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 GPR32P1Q8NGA4 272 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 OR4C15Q8NGM1 316 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 APOBEC4Q8WW27 367 aaKnown RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 NR4A3Q92570 626 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 CCDC74AQ96AQ1 378 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 FKBP10Q96AY3 582 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 MMABQ96EY8 250 aaPredicted RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 RMND5BQ96G75 393 aaPredicted RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 ZNF578Q96N58 590 aaPredicted RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 STACQ99469 402 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 PSD2Q9BQI7 771 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 PELOQ9BRX2 385 aaKnown RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 PINK1Q9BXM7 581 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 MRPS26Q9BYN8 205 aaKnown RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 AMBRA1Q9C0C7 1298 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 PIGUQ9H490 435 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 TOR3AQ9H497 397 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 MTHFD2LQ9H903 347 aaPredicted RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 CUTCQ9NTM9 273 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 ACER3Q9NUN7 267 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 MAT2BQ9NZL9 334 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 TMEFF2Q9UIK5 374 aaPredicted RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 SERTAD3Q9UJW9 196 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 KCND3Q9UK17 655 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 SLC9A8Q9Y2E8 581 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 MYRFQ9Y2G1 1151 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 IFT52Q9Y366 437 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 SH3GLB1Q9Y371 365 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 LYVE1Q9Y5Y7 322 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 KCNE3Q9Y6H6 103 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 HSPE1-MOB4S4R3N1 261 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 U3KQV3 271 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 ZFYVE26Q68DK2 2539 aa7.53□□□□□ -1.2
COL4A5-208ENST00000505728 DSPP15924 2871 aaKnown RBP7.53□□□□□ -1.2
COL4A5-208ENST00000505728 NBEAQ8NFP9 2946 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 LOC100130705A0A1B0GUX0 176 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 EME2A4GXA9 379 aaPredicted RBP7.52□□□□□ -1.21
COL4A5-208ENST00000505728 DPPA5A6NC42 116 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 ARRDC5A6NEK1 342 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 EIF4E1BA6NMX2 242 aaKnown RBP7.52□□□□□ -1.21
COL4A5-208ENST00000505728 TMEM150CB9EJG8 249 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 H3BMH7 237 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 PCDHGA12O60330 932 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 OR10H2O60403 315 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 OR2B3O76000 313 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 GADD45GO95257 159 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 CER1O95813 267 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 RECKO95980 971 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 ALPPP05187 535 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 GUSBP08236 651 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 SYPP08247 313 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 ZNF806P0C7X5 589 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 PABPC4LP0CB38 370 aaKnown RBP7.52□□□□□ -1.21
COL4A5-208ENST00000505728 SMIM18P0DKX4 95 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 ACP2P11117 423 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 TNFRSF1BP20333 461 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 IGFBP5P24593 272 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 RYKP34925 604 aa7.52□□□□□ -1.21
COL4A5-208ENST00000505728 PTGER1P34995 402 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms