RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 ALDH18A1P54886 795 aaKnown RBP5.31□□□□□ -1.56
GYPB-205ENST00000505583 PLTPP55058 493 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 GFRA1P56159 465 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 CLDN18P56856 261 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 MRPS35P82673 323 aaKnown RBP5.31□□□□□ -1.56
GYPB-205ENST00000505583 SORDQ00796 357 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 GUCY2DQ02846 1103 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 C2orf54Q08AI8 447 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 FAM27E3Q08E93 113 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 GALNT1Q10472 559 aaPredicted RBP5.31□□□□□ -1.56
GYPB-205ENST00000505583 TRAF3Q13114 568 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 PCBP2Q15366 365 aaKnown RBP eCLIP5.31□□□□□ -1.56
GYPB-205ENST00000505583 LTB4RQ15722 352 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 PRICKLE4Q2TBC4 344 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 TRMT12Q53H54 448 aaKnown RBP5.31□□□□□ -1.56
GYPB-205ENST00000505583 SGO1Q5FBB7 561 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 MROH9Q5TGP6 573 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 HLA-DQA1Q5Y7H0 255 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 OR5M10Q6IEU7 315 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 CLEC9AQ6UXN8 241 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 C22orf34Q6ZV56 151 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 CCDC25Q86WR0 208 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 KIF18BQ86Y91 864 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 TRIM42Q8IWZ5 723 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 OR4K14Q8NGD5 310 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 OR1J4Q8NGS1 313 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 RHEBL1Q8TAI7 183 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 FBXO25Q8TCJ0 367 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 ZPLD1Q8TCW7 415 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 INTS12Q96CB8 462 aaKnown RBP5.31□□□□□ -1.56
GYPB-205ENST00000505583 CTHRC1Q96CG8 243 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 OMA1Q96E52 524 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 DACH2Q96NX9 599 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 SECISBP2Q96T21 854 aaKnown RBP5.31□□□□□ -1.56
GYPB-205ENST00000505583 CENPKQ9BS16 269 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 YIPF4Q9BSR8 244 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 RBM24Q9BX46 236 aaKnown RBP5.31□□□□□ -1.56
GYPB-205ENST00000505583 BRINP2Q9C0B6 783 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 NOL11Q9H8H0 719 aaKnown RBP5.31□□□□□ -1.56
GYPB-205ENST00000505583 METTL7AQ9H8H3 244 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 ZBTB26Q9HCK0 441 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 FARSBQ9NSD9 589 aaKnown RBP5.31□□□□□ -1.56
GYPB-205ENST00000505583 C6orf203Q9P0P8 240 aaPredicted RBP5.31□□□□□ -1.56
GYPB-205ENST00000505583 CPSF2Q9P2I0 782 aaKnown RBP5.31□□□□□ -1.56
GYPB-205ENST00000505583 CLCF1Q9UBD9 225 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 HEY2Q9UBP5 337 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 ZNF639Q9UID6 485 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 FBXL2Q9UKC9 423 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 ACOT9Q9Y305 439 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 PLLPQ9Y342 182 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 ANGPTL3Q9Y5C1 460 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 DNHD1Q96M86 4753 aa5.31□□□□□ -1.56
GYPB-205ENST00000505583 NSD1Q96L73 2696 aaPredicted RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 A0A096LPK6 155 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 TRIM64A6NGJ6 449 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 TRIM64BA6NI03 449 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 SYCE1LA8MT33 242 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 CAPN14A8MX76 684 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 H0Y3Z8 333 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 H0YC42 278 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 H7C1Q1 480 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 PLOD2O00469 737 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 ZIC3O60481 467 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 UGDHO60701 494 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 ERN1O75460 977 aaKnown RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 SEMA3DO95025 777 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 KLHL2O95198 593 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 CLDN9O95484 217 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 ALDOAP04075 364 aaKnown RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 HEXAP06865 529 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 CT45A8P0DMV1 189 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 CT45A9P0DMV2 189 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 BMP2P12643 396 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 PORP16435 677 aaPredicted RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 TSPAN8P19075 237 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 ADSLP30566 484 aaPredicted RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 CCKARP32238 428 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 GPC1P35052 558 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 CPOXP36551 454 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 TMED10P49755 219 aaKnown RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 LHX2P50458 406 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 RNF144AP50876 292 aaPredicted RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 TPD52P55327 224 aaPredicted RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 CLDN15P56746 228 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 NRG3P56975 720 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 CORO7P57737 925 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 B3GALT5-AS1P59052 145 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 HMGCS1Q01581 520 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 MAP4K2Q12851 820 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 ILF2Q12905 390 aaKnown RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 CALCOCO2Q13137 446 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 RCAN2Q14206 197 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 CT45A2Q5DJT8 189 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 TECRLQ5HYJ1 363 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 Q5PR19 223 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 TCHHL1Q5QJ38 904 aaPredicted RBP5.3□□□□□ -1.56
GYPB-205ENST00000505583 CCNYL2Q5T2Q4 361 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 FRG2Q64ET8 278 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 SLC30A6Q6NXT4 461 aa5.3□□□□□ -1.56
GYPB-205ENST00000505583 SLC48A1Q6P1K1 146 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms