RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 PLSCR1O15162 318 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 NBR2O15453 112 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 SH3BGRLO75368 114 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 STK17BO94768 372 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 CLDN14O95500 239 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 S100A6P06703 90 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 CD59P13987 128 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 PRF1P14222 555 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 ETS2P15036 469 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 GSTM3P21266 225 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 CA4P22748 312 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 AHRP35869 848 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 HPCAL1P37235 193 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 NAMPTP43490 491 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 CASP4P49662 377 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 SGSHP51688 502 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 NDST2P52849 883 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 YWHAGP61981 247 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 YWHAEP62258 255 aaKnown RBP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 RAB11AP62491 216 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 TNNC1P63316 161 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 DGCR2P98153 550 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 EWSR1Q01844 656 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 NHLH1Q02575 133 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 MAB21L1Q13394 359 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 XRCC4Q13426 336 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 TUBA3CQ13748 450 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 TFDP1Q14186 410 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 RAB11BQ15907 218 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 C3AR1Q16581 482 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 CALCRLQ16602 461 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZSWIM7Q19AV6 140 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 SBK1Q52WX2 424 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 BEX5Q5H9J7 111 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 DCAF10Q5QP82 559 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 MANEAQ5SRI9 462 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 SLX4IPQ5VYV7 408 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 RHBDD2Q6NTF9 364 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 FAM71F2Q6NXP2 309 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 TUBA3EQ6PEY2 450 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 BHLHB9Q6PI77 547 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF730Q6ZMV8 503 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 FJX1Q86VR8 437 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 TBC1D10CQ8IV04 446 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 NAGSQ8N159 534 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 CLDN19Q8N6F1 224 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 FAM98AQ8NCA5 519 aaKnown RBP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 ICA1LQ8NDH6 482 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 TMEM104Q8NE00 496 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 CHDHQ8NE62 594 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 SDR9C7Q8NEX9 313 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 KBTBD8Q8NFY9 601 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR4K14Q8NGD5 310 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR5T3Q8NGG3 340 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 CLHC1Q8NHS4 586 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 CNIH3Q8TBE1 160 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 GLYATL2Q8WU03 294 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 C18orf25Q96B23 403 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 SLC25A36Q96CQ1 311 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 PELI1Q96FA3 418 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 SCRN2Q96FV2 425 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 TIMD4Q96H15 378 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 C7orf34Q96L11 122 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 C4orf45Q96LM5 186 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 SLC38A2Q96QD8 506 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 CCM2Q9BSQ5 444 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 BBS2Q9BXC9 721 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 PINK1Q9BXM7 581 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 NDEL1Q9GZM8 345 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 CXXC4Q9H2H0 198 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 FBXO44Q9H4M3 255 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 TDRD3Q9H7E2 651 aaKnown RBP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 C8orf33Q9H7E9 229 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF703Q9H7S9 590 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 APOBEC3GQ9HC16 384 aaKnown RBP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF701Q9NV72 531 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 SYBUQ9NX95 663 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 GPR83Q9NYM4 423 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 KLRF1Q9NZS2 232 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 CD300AQ9UGN4 299 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF639Q9UID6 485 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 PILRBQ9UKJ0 227 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 VANGL2Q9ULK5 521 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 STAP1Q9ULZ2 295 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 RNF6Q9Y252 685 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 KLHDC2Q9Y2U9 406 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 RHBDD3Q9Y3P4 386 aa3.27□□□□□ -1.89
HMGB1P22-201ENST00000505315 FNDC1Q4ZHG4 1894 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZMYM2Q9UBW7 1377 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 TRBV4-1A0A0J9YWV2 114 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 LOC101059948A0A1B0GTJ6 334 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 A0A1B0GVT2 93 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 RAB19A4D1S5 217 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 SMCO2A6NFE2 343 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 LILRA5A6NI73 299 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 OR6C75A6NL08 312 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 SHISA7A6NL88 538 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 A8MXQ7 604 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 ZNF814B7Z6K7 855 aa3.26□□□□□ -1.89
HMGB1P22-201ENST00000505315 TCP10L2B9ZVM9 353 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms