RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 GTDC1Q4AE62 458 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 TTLL10Q6ZVT0 673 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 NRMQ8IXM6 262 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 MDGA1Q8NFP4 955 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 FNDC8Q8TC99 324 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 MS4A4EQ96PG1 132 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 OR1F2PQ96R84 312 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 ABCG5Q9H222 651 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 ZDHHC7Q9NXF8 308 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 KLHL42Q9P2K6 505 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 FBXL3Q9UKT7 428 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 ACTL7AQ9Y615 435 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 GPR89AB7ZAQ6 455 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 MITFO75030 526 aaPredicted RBP15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 CD3GP09693 182 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 GPR89BP0CG08 455 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 MPP7Q5T2T1 576 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 CPZQ66K79 652 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 PEX11GQ96HA9 241 aa15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 NUFIP1Q9UHK0 495 aaKnown RBP15.7■□□□□ 0.1
PCDHA1-203ENST00000504120 SLC33A1O00400 549 aaPredicted RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 ZNF217O75362 1048 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 SEMA4FO95754 770 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 GPX3P22352 226 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 IL4RP24394 825 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 DCTP40126 519 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 ZNF140P52738 457 aaPredicted RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 APOFQ13790 326 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 ZER1Q7Z7L7 766 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 CPXM2Q8N436 756 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 ACVR1CQ8NER5 493 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 THAP3Q8WTV1 239 aaPredicted RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 TMEM174Q8WUU8 243 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 KLF16Q9BXK1 252 aaPredicted RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 GJD2Q9UKL4 321 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 CARD8Q9Y2G2 431 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 PIAS3Q9Y6X2 628 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 TFPTP0C1Z6 253 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 S100A2P29034 98 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 NFATC3Q12968 1075 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 LSAMPQ13449 338 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 OR13C3Q8NGS6 347 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 METTL2AQ96IZ6 378 aaKnown RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 HDHD5Q9BXW7 423 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 CPEB1Q9BZB8 566 aaKnown RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 ENTPD2Q9Y5L3 495 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 CCINQ13939 588 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 KEAP1Q14145 624 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 DPPA4Q7L190 304 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 ARHGAP12Q8IWW6 846 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 TMEM151AQ8N4L1 468 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 FOXJ1Q92949 421 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 CHFRQ96EP1 664 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 MSLNLQ96KJ4 702 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 CSNK1G1Q9HCP0 422 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 RARRES3Q9UL19 164 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 DNMT3AQ9Y6K1 912 aaPredicted RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 A8MV72 311 aaPredicted RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 CFL1P23528 166 aaKnown RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 STT3AP46977 705 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 FOXA1P55317 472 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 ATXN7L3Q14CW9 347 aaPredicted RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 ZNF542PQ5EBM4 170 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 PLBD1Q6P4A8 553 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 GPR26Q8NDV2 337 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 OR5AR1Q8NGP9 310 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 OR13J1Q8NGT2 312 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 ZDHHC1Q8WTX9 485 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 OR4K3Q96R72 315 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 NTMT1Q9BV86 223 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 PITHD1Q9GZP4 211 aaPredicted RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 NMNAT1Q9HAN9 279 aaPredicted RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 ARNT2Q9HBZ2 717 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 CD93Q9NPY3 652 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 DMRT3Q9NQL9 472 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 ZNF701Q9NV72 531 aaPredicted RBP15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 BTAF1O14981 1849 aa15.69■□□□□ 0.1
PCDHA1-203ENST00000504120 BORCS7-ASMTA0A0B4J1R7 106 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 DDCP20711 480 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 ITGB7P26010 798 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 EIF2S3P41091 472 aaKnown RBP15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 SERPINA11Q86U17 422 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 ANKRD13BQ86YJ7 626 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 FRS2Q8WU20 508 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 ARNTLO00327 626 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 GABBR2O75899 941 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 HNRNPA2B1P22626 353 aaKnown RBP15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 ART1P52961 327 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 PPP5CP53041 499 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 CTBP2P56545 445 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 CARD17Q5XLA6 110 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 SLC18B1Q6NT16 456 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 CCBE1Q6UXH8 406 aaPredicted RBP15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 LARP4Q71RC2 724 aaKnown RBP eCLIP15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 PDZD3Q86UT5 571 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 TMEM173Q86WV6 379 aaPredicted RBP15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 CNTN4Q8IWV2 1026 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 CDRT4Q8N9R6 151 aa15.68■□□□□ 0.1
PCDHA1-203ENST00000504120 AP1M2Q9Y6Q5 423 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms