RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 NSRP1Q9H0G5 558 aaKnown RBP13.09□□□□□ -0.31
RNF4-202ENST00000502316 SLC52A3Q9NQ40 469 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 SERHLQ9NQF3 203 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 ZCCHC3Q9NUD5 404 aaKnown RBP13.09□□□□□ -0.31
RNF4-202ENST00000502316 MRGBPQ9NV56 204 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 ANKRD10Q9NXR5 420 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 LRFN1Q9P244 771 aa13.09□□□□□ -0.31
RNF4-202ENST00000502316 A8MVJ9 347 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 CFLARO15519 480 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 NME6O75414 186 aaPredicted RBP13.08□□□□□ -0.32
RNF4-202ENST00000502316 SORBS2O94875 1100 aaKnown RBP13.08□□□□□ -0.32
RNF4-202ENST00000502316 ABCB1P08183 1280 aaPredicted RBP13.08□□□□□ -0.32
RNF4-202ENST00000502316 NAGAP17050 411 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 ABCD3P28288 659 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 CCT3P49368 545 aaKnown RBP13.08□□□□□ -0.32
RNF4-202ENST00000502316 ST13P50502 369 aaKnown RBP13.08□□□□□ -0.32
RNF4-202ENST00000502316 NRG3P56975 720 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 CORO7P57737 925 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 OC90Q02509 493 aaPredicted RBP13.08□□□□□ -0.32
RNF4-202ENST00000502316 ZNF155Q12901 538 aaPredicted RBP13.08□□□□□ -0.32
RNF4-202ENST00000502316 NFATC3Q12968 1075 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 ZNF169Q14929 603 aaPredicted RBP13.08□□□□□ -0.32
RNF4-202ENST00000502316 TIGD2Q4W5G0 525 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 SPINK14Q6IE38 97 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 MFSD12Q6NUT3 480 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 ZCCHC12Q6PEW1 402 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 SPATA21Q7Z572 469 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 PTRH1Q86Y79 214 aaKnown RBP13.08□□□□□ -0.32
RNF4-202ENST00000502316 CYP4Z2PQ8N1L4 340 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 CDRT4Q8N9R6 151 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 Q8NA96 180 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 GOLM1Q8NBJ4 401 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 OR4A15Q8NGL6 344 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 VPS33AQ96AX1 596 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 SPACA9Q96E40 222 aaPredicted RBP13.08□□□□□ -0.32
RNF4-202ENST00000502316 SCMH1Q96GD3 660 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 SGCZQ96LD1 299 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 MFRPQ9BY79 579 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.08□□□□□ -0.32
RNF4-202ENST00000502316 GPATCH2Q9NW75 528 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 HPF1Q9NWY4 346 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 CCDC167Q9P0B6 97 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 ANAPC2Q9UJX6 822 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 PCDHGB4Q9UN71 923 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 SNX8Q9Y5X2 465 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 NPFFR2Q9Y5X5 522 aa13.08□□□□□ -0.32
RNF4-202ENST00000502316 NUP214P35658 2090 aaPredicted RBP13.08□□□□□ -0.32
RNF4-202ENST00000502316 SNX3O60493 162 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 SHOX2O60902 331 aaPredicted RBP13.07□□□□□ -0.32
RNF4-202ENST00000502316 SLC25A12O75746 678 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 C1QL1O75973 258 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 NKX2-2O95096 273 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 HMGN2P05204 90 aaKnown RBP13.07□□□□□ -0.32
RNF4-202ENST00000502316 TMED10P49755 219 aaKnown RBP13.07□□□□□ -0.32
RNF4-202ENST00000502316 PRKAG1P54619 331 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 KCNK10P57789 538 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 SF3A3Q12874 501 aaKnown RBP eCLIP13.07□□□□□ -0.32
RNF4-202ENST00000502316 GAB1Q13480 694 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 NNATQ16517 81 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 NTRK2Q16620 822 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 MAPKAPK3Q16644 382 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 PLEKHN1Q494U1 663 aaPredicted RBP13.07□□□□□ -0.32
RNF4-202ENST00000502316 VPS26BQ4G0F5 336 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 AGKQ53H12 422 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 RPUSD3Q6P087 351 aaKnown RBP13.07□□□□□ -0.32
RNF4-202ENST00000502316 BHLHB9Q6PI77 547 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 IL20RBQ6UXL0 311 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 SPDL1Q96EA4 605 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 PANX1Q96RD7 426 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 ELAC2Q9BQ52 826 aaKnown RBP13.07□□□□□ -0.32
RNF4-202ENST00000502316 RMND5AQ9H871 391 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 SH2D2AQ9NP31 389 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 EQTNQ9NQ60 294 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 SAR1AQ9NR31 198 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 GIN1Q9NXP7 522 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 RALYQ9UKM9 306 aaKnown RBP13.07□□□□□ -0.32
RNF4-202ENST00000502316 PCDHGA10Q9Y5H3 936 aa13.07□□□□□ -0.32
RNF4-202ENST00000502316 RNF103-CHMP3A0A140T963 221 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 ASPDHA6ND91 283 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 CCDC154A6NI56 674 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 CAPN14A8MX76 684 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 NME2P1O60361 137 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 PPM1BO75688 479 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 CPSF4O95639 269 aaKnown RBP13.06□□□□□ -0.32
RNF4-202ENST00000502316 SP1P08047 785 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 ZCCHC18P0CG32 403 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 CD46P15529 392 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 CD1EP15812 388 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 CAPN3P20807 821 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 NME2P22392 152 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 UQCRC2P22695 453 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 PTPN6P29350 595 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 SOAT1P35610 550 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 CDKN2CP42773 168 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 PRIM2P49643 509 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 TP53BP2Q13625 1128 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 ZNHIT3Q15649 155 aaPredicted RBP13.06□□□□□ -0.32
RNF4-202ENST00000502316 SPDYE7PQ495Y7 208 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 CYP27C1Q4G0S4 372 aa13.06□□□□□ -0.32
RNF4-202ENST00000502316 ZNF766Q5HY98 468 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms