RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 CXCL17Q6UXB2 119 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 CD300LGQ6UXG3 332 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 ZNF841Q6ZN19 808 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 Q6ZVQ6 151 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 ZNF571Q7Z3V5 609 aaPredicted RBP2.3□□□□□ -2.04
RIF1-212ENST00000498041 ANKRD46Q86W74 232 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 OR4N5Q8IXE1 308 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 EFCAB13Q8IY85 973 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 DND1Q8IYX4 353 aaKnown RBP2.3□□□□□ -2.04
RIF1-212ENST00000498041 SLC35F6Q8N357 371 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 CSGALNACT2Q8N6G5 542 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 TMEM161BQ8NDZ6 487 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 DNAJB3Q8WWF6 145 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 DNASE1L2Q92874 299 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 TOMM40LQ969M1 308 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 FAM162AQ96A26 154 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 EXOC4Q96A65 974 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 CEP170P1Q96L14 293 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 B3GALT6Q96L58 329 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 INTS14Q96SY0 518 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 FAM213AQ9BRX8 229 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 TMEM117Q9H0C3 514 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 TRPV6Q9H1D0 765 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 C3orf14Q9HBI5 128 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 RAB9BQ9NP90 201 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 ZNF302Q9NR11 478 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 AGPAT3Q9NRZ7 376 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 DMAC2Q9NW81 257 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 CYTH4Q9UIA0 394 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 RWDD2AQ9UIY3 292 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 NOCTQ9UK39 431 aaKnown RBP2.3□□□□□ -2.04
RIF1-212ENST00000498041 DNAJC12Q9UKB3 198 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 GMEB2Q9UKD1 530 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 PCDHGA1Q9Y5H4 931 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 ATP6V1DQ9Y5K8 247 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 SNX10Q9Y5X0 201 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 FRMPD4Q14CM0 1322 aa2.3□□□□□ -2.04
RIF1-212ENST00000498041 VWA8A3KMH1 1905 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ILVBLA1L0T0 632 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ARHGEF35A5YM69 484 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ZSCAN5CA6NGD5 496 aaPredicted RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 LRRIQ4A6NIV6 560 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ARHGEF33A8MVX0 844 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SIGLEC5O15389 551 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 MLNRO43193 412 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SCO2O43819 266 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 FAM189A1O60320 539 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SELENOFO60613 162 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 LETM1O95202 739 aaPredicted RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 HSPA4LO95757 839 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 CHRNA1P02708 482 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 RLN1P04808 185 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 LGALS2P05162 132 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ADORA3P0DMS8 318 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SMIM10L2AP0DMW4 78 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SMIM10L2BP0DMW5 78 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ETS1P14921 441 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ITIH1P19827 911 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 LMO2P25791 158 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 QARSP47897 775 aaKnown RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 ZFP36L2P47974 494 aaKnown RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 NPBWR1P48145 328 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 CSRP3P50461 194 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 NDUFV3P56181 108 aaKnown RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 KRTAP10-3P60369 221 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 MYL6P60660 151 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ABCE1P61221 599 aaKnown RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 PSMC5P62195 406 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 RPP38P78345 283 aaKnown RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 SRPXP78539 464 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 TSPY1Q01534 308 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 OGDHQ02218 1023 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ZFP36L1Q07352 338 aaKnown RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 SCN1BQ07699 218 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 C2orf54Q08AI8 447 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 LAMTOR4Q0VGL1 99 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ABRQ12979 859 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 EMC2Q15006 297 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 MAPK11Q15759 364 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 MLF2Q15773 248 aaPredicted RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 STXBP2Q15833 593 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 TPD52L1Q16890 204 aaPredicted RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 KNOP1Q1ED39 458 aaKnown RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 DEFB115Q30KQ5 88 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 CCDC40Q4G0X9 1142 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ARMCX4Q5H9R4 360 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SDHAF4Q5VUM1 108 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ATL3Q6DD88 541 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ZNF770Q6IQ21 691 aaPredicted RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 GALNT17Q6IS24 598 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SLC27A4Q6P1M0 643 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SCARA5Q6ZMJ2 495 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ANKRD23Q86SG2 305 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SLC25A42Q86VD7 318 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ZSCAN30Q86W11 494 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 VSIG1Q86XK7 387 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ZC3H3Q8IXZ2 948 aaKnown RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 MYOCDQ8IZQ8 938 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SLC39A11Q8N1S5 342 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 NME8Q8N427 588 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms