RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 GNSP15586 552 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 HOXB9P17482 250 aaPredicted RBP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 ENGP17813 658 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 POLR2CP19387 275 aaPredicted RBP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 PRPS1L1P21108 318 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 GSTM2P28161 218 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 TIA1P31483 386 aaKnown RBP eCLIP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 HOXD12P35452 270 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 BSGP35613 385 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 HNRNPFP52597 415 aaKnown RBP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 ARFIP1P53367 373 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 NME5P56597 212 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 WNT3P56703 355 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 C21orf59P57076 290 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 LOXL3P58215 753 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 PPP1CAP62136 330 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 ELF3P78545 371 aaPredicted RBP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 DDX39BQ13838 428 aaKnown RBP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 CEACAM7Q14002 265 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 NR1D2Q14995 579 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 RBBP5Q15291 538 aaKnown RBP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 RPS6KA2Q15349 733 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 DEFB133Q30KQ1 61 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 C14orf28Q4W4Y0 310 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 SPIN4Q56A73 249 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 PAGE3Q5JUK9 113 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 CACHD1Q5VU97 1274 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 KHDRBS2Q5VWX1 349 aaKnown RBP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 SPESP1Q6UW49 350 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 DLEU7Q6UYE1 221 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 COMMD6Q7Z4G1 85 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 VN1R4Q7Z5H5 301 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 CAMKMTQ7Z624 323 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 TRIM73Q86UV7 250 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 PLD3Q8IV08 490 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 FAM9CQ8IZT9 166 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 PGAM4Q8N0Y7 254 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 MINDY1Q8N5J2 469 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 DPP10Q8N608 796 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 KRTCAP2Q8N6L1 136 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 C1orf52Q8N6N3 182 aaKnown RBP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 TTLQ8NG68 377 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 NT5CQ8TCD5 201 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 SAP25Q8TEE9 199 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 RSC1A1Q92681 617 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 ZUFSPQ96AP4 578 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 VPS33AQ96AX1 596 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 TESCQ96BS2 214 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 COQ8BQ96D53 544 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 SPDL1Q96EA4 605 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 SMIM10Q96HG1 83 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 EGLN2Q96KS0 407 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 PPM1MQ96MI6 270 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 F2RL3Q96RI0 385 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 NPAS2Q99743 824 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 PTDSS2Q9BVG9 487 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 MRPL1Q9BYD6 325 aaKnown RBP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 PRSS22Q9GZN4 317 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 RAB33BQ9H082 229 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 ABCG4Q9H172 646 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 DDX31Q9H8H2 851 aaKnown RBP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 LHX9Q9NQ69 397 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 NMRK1Q9NWW6 199 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 HRASLS2Q9NWW9 162 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 EPHA6Q9UF33 1036 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 CD300AQ9UGN4 299 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 SLC7A8Q9UHI5 535 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 POMT2Q9UKY4 750 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 PRPF19Q9UMS4 504 aaKnown RBP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 ERVK-11Q9UQG0 969 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 KLHL20Q9Y2M5 609 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 NDUFAF1Q9Y375 327 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 NEUROG3Q9Y4Z2 214 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.04□□□□□ -1.6
GGPS1-208ENST00000497327 CABIN1Q9Y6J0 2220 aa5.04□□□□□ -1.6
GGPS1-208ENST00000497327 TRBV5-3A0A0A0MS03 114 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 LY6G6EA0A0G2JKS1 128 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 A0A0J9YY10 115 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 ANKDD1BA6NHY2 528 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 GABRR3A8MPY1 467 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 C4orf51C9J302 202 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 SAP18O00422 153 aaKnown RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 NR5A2O00482 541 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 TRIM38O00635 465 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 CFLARO15519 480 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 B4GAT1O43505 415 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 TMPRSS11DO60235 418 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 MGRN1O60291 552 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 TBX19O60806 448 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 SDC3O75056 442 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 SH3BGRLO75368 114 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 SCELO95171 688 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 NTN1O95631 604 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 NPPAP01160 153 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 IL6P05231 212 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 FESP07332 822 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 EZRP15311 586 aaKnown RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 MAGP20916 626 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 EPHA8P29322 1005 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms