RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 CCDC14Q49A88 953 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 SPATA46Q5T0L3 261 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 LINC00696Q6ZRV3 163 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 GALNTL5Q7Z4T8 443 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 OR8H3Q8N146 312 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 EHD1Q9H4M9 534 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 HPS4Q9NQG7 708 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 PNPLA3Q9NST1 481 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 ACOXLQ9NUZ1 547 aa2.03□□□□□ -2.08
VPS26A-208ENST00000497022 PTPRUQ92729 1446 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 SCN2AQ99250 2005 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 A4D1N5 150 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 C11orf98E9PRG8 122 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 NOL4O94818 638 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 ECDO95905 644 aaPredicted RBP2.02□□□□□ -2.09
VPS26A-208ENST00000497022 FUT3P21217 361 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 POU3F4P49335 361 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 UCP2P55851 309 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 SMC1AQ14683 1233 aaKnown RBP2.02□□□□□ -2.09
VPS26A-208ENST00000497022 SGCBQ16585 318 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 TYSND1Q2T9J0 566 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 ZNF528Q3MIS6 628 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 IRGCQ6NXR0 463 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 LINC01555Q8NAE3 123 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 LHX4Q969G2 390 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 TSPYL1Q9H0U9 437 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 DCLRE1BQ9H816 532 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 KCNMB3Q9NPA1 279 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 KLK12Q9UKR0 248 aa2.02□□□□□ -2.09
VPS26A-208ENST00000497022 FOXA2Q9Y261 457 aaPredicted RBP2.02□□□□□ -2.09
VPS26A-208ENST00000497022 PDLIM1O00151 329 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 WWP2O00308 870 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 EEF2KO00418 725 aaKnown RBP2.01□□□□□ -2.09
VPS26A-208ENST00000497022 OR7A17O14581 309 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 SFTPBP07988 381 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 SERPINF2P08697 491 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 UGT1A3P35503 534 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 SLC26A2P50443 739 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 YWHAHQ04917 246 aaPredicted RBP2.01□□□□□ -2.09
VPS26A-208ENST00000497022 NPRL3Q12980 569 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 ORC2Q13416 577 aaPredicted RBP2.01□□□□□ -2.09
VPS26A-208ENST00000497022 HERPUD1Q15011 391 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 PRAMEF8Q5VWM4 474 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 PRR5LQ6MZQ0 368 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 C9orf40Q8IXQ3 194 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 SYCP3Q8IZU3 236 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 PYROXD2Q8N2H3 581 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 NAT8LQ8N9F0 302 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 OR52J3Q8NH60 311 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 GOT1L1Q8NHS2 421 aaPredicted RBP2.01□□□□□ -2.09
VPS26A-208ENST00000497022 RAB39BQ96DA2 213 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 CFAP36Q96G28 342 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 ACCSQ96QU6 501 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 TSSK1BQ9BXA7 367 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 Q9H3A6 140 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 ABCB8Q9NUT2 735 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 CNIH4Q9P003 139 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 ERVK-18Q9QC07 812 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 ZNF221Q9UK13 617 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 LIPT1Q9Y234 373 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 KLHDC2Q9Y2U9 406 aa2.01□□□□□ -2.09
VPS26A-208ENST00000497022 MRPS2Q9Y399 296 aaKnown RBP2.01□□□□□ -2.09
VPS26A-208ENST00000497022 MTCL1Q9Y4B5 1905 aaKnown RBP2.01□□□□□ -2.09
VPS26A-208ENST00000497022 IGKV6-21A0A0C4DH24 114 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2□□□□□ -2.09
VPS26A-208ENST00000497022 CACNB4O00305 520 aaPredicted RBP2□□□□□ -2.09
VPS26A-208ENST00000497022 CHEK1O14757 476 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 PSMA7O14818 248 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 LATO43561 262 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 CA11O75493 328 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 ALOX5P09917 674 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 PSG2P11465 335 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 TCF7P36402 384 aaPredicted RBP2□□□□□ -2.09
VPS26A-208ENST00000497022 ACVR1BP36896 505 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 IL18R1Q13478 541 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 FUT11Q495W5 492 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 LGSNQ5TDP6 509 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 TRPM8Q7Z2W7 1104 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 PRSS42Q7Z5A4 293 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 TSEN54Q7Z6J9 526 aaKnown RBP2□□□□□ -2.09
VPS26A-208ENST00000497022 TMEM179BQ7Z7N9 219 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 SLC22A16Q86VW1 577 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 MCOLN2Q8IZK6 566 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 OR4A16Q8NH70 328 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 P3H4Q92791 437 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 MARC2Q969Z3 335 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 DNAJA3Q96EY1 480 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 C11orf24Q96F05 449 aaPredicted RBP2□□□□□ -2.09
VPS26A-208ENST00000497022 DHTKD1Q96HY7 919 aaPredicted RBP2□□□□□ -2.09
VPS26A-208ENST00000497022 GPR137Q96N19 417 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 PLEKHF1Q96S99 279 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 APOOQ9BUR5 198 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 TM2D1Q9BX74 207 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 ALG9Q9H6U8 611 aa2□□□□□ -2.09
VPS26A-208ENST00000497022 COPS7BQ9H9Q2 264 aaPredicted RBP2□□□□□ -2.09
VPS26A-208ENST00000497022 EXOSC3Q9NQT5 275 aaKnown RBP2□□□□□ -2.09
VPS26A-208ENST00000497022 A0A0J9YVX5 310 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 PGK1P00558 417 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 SMSP52788 366 aa1.99□□□□□ -2.09
VPS26A-208ENST00000497022 RAG2P55895 527 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms