RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 MAPRE3Q9UPY8 281 aa11.82□□□□□ -0.52
FN1-226ENST00000496542 PRRC2AP48634 2157 aaKnown RBP11.82□□□□□ -0.52
FN1-226ENST00000496542 FRG2CA6NGY1 282 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 HAX1O00165 279 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 ICOSLGO75144 302 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 NME6O75414 186 aaPredicted RBP11.81□□□□□ -0.52
FN1-226ENST00000496542 REM1O75628 298 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 IL2RAP01589 272 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 ENO1P06733 434 aaKnown RBP11.81□□□□□ -0.52
FN1-226ENST00000496542 IMPDH1P20839 514 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 CEACAM8P31997 349 aaPredicted RBP11.81□□□□□ -0.52
FN1-226ENST00000496542 GCKP35557 465 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 TIMP3P35625 211 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 PTGDSP41222 190 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 KIR2DL3P43628 341 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 PPICP45877 212 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 EMDP50402 254 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 ART1P52961 327 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 PRKAA2P54646 552 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 NAGLUP54802 743 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 RAE1P78406 368 aaKnown RBP11.81□□□□□ -0.52
FN1-226ENST00000496542 BTKQ06187 659 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 LCP2Q13094 533 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 SF3B4Q15427 424 aaKnown RBP eCLIP11.81□□□□□ -0.52
FN1-226ENST00000496542 SPIN4Q56A73 249 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 ZNF628Q5EBL2 1059 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 NHSL2Q5HYW2 709 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 NSUN5P2Q63ZY6 315 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 SCIMPQ6UWF3 145 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 SPNS3Q6ZMD2 512 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 LCA5Q86VQ0 697 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 SLC22A9Q8IVM8 553 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 IFT20Q8IY31 132 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 CCDC116Q8IYX3 515 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 GBP7Q8N8V2 638 aaPredicted RBP11.81□□□□□ -0.52
FN1-226ENST00000496542 OR9A2Q8NGT5 310 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 CDC26Q8NHZ8 85 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 RDH11Q8TC12 318 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 ZNF675Q8TD23 568 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 C16orf78Q8WTQ4 265 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 TMBIM1Q969X1 311 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 NTNG2Q96CW9 530 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 LRRC46Q96FV0 321 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 APIPQ96GX9 242 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 WDYHV1Q96HA8 205 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 COL21A1Q96P44 957 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 KCNA7Q96RP8 456 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 SH3GL2Q99962 352 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 GIMAP4Q9NUV9 329 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 DNAJB12Q9NXW2 375 aaKnown RBP11.81□□□□□ -0.52
FN1-226ENST00000496542 CRIM1Q9NZV1 1036 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 PSMC3IPQ9P2W1 217 aaPredicted RBP11.81□□□□□ -0.52
FN1-226ENST00000496542 STK38LQ9Y2H1 464 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 TIMM22Q9Y584 194 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 MED12LQ86YW9 2145 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 ZFHX3Q15911 3703 aa11.81□□□□□ -0.52
FN1-226ENST00000496542 SYT5O00445 386 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 TO15178 435 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 FAM153BP0C7A2 387 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 RHOXF2BP0C7M4 288 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 PYGBP11216 843 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 DRD2P14416 443 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 DRD5P21918 477 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 TIA1P31483 386 aaKnown RBP eCLIP11.8□□□□□ -0.522e-7■■□□□ 12
FN1-226ENST00000496542 DNAJA1P31689 397 aaKnown RBP11.8□□□□□ -0.52
FN1-226ENST00000496542 AGFG1P52594 562 aaKnown RBP11.8□□□□□ -0.52
FN1-226ENST00000496542 ZNF136P52737 540 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 PKNOX1P55347 436 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 CORO7P57737 925 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 SNTA1Q13424 505 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 ERCC6LQ2NKX8 1250 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 FAM153CQ494X1 144 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 TMEM81Q6P7N7 255 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 CCNYL1Q8N7R7 359 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 CEP112Q8N8E3 955 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 OR14L1PQ8NHC6 308 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 ACMSDQ8TDX5 336 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 RNASE6Q93091 150 aaKnown RBP11.8□□□□□ -0.52
FN1-226ENST00000496542 L3HYPDHQ96EM0 354 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 BTBD9Q96Q07 612 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 RHOXF2Q9BQY4 288 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 GPATCH1Q9BRR8 931 aaKnown RBP11.8□□□□□ -0.52
FN1-226ENST00000496542 POLDIP3Q9BY77 421 aaKnown RBP11.8□□□□□ -0.52
FN1-226ENST00000496542 SENP1Q9P0U3 644 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 TBK1Q9UHD2 729 aa11.8□□□□□ -0.52
FN1-226ENST00000496542 GPR55Q9Y2T6 319 aaPredicted RBP11.8□□□□□ -0.52
FN1-226ENST00000496542 FLNAP21333 2647 aaKnown RBP11.79□□□□□ -0.52
FN1-226ENST00000496542 CCDC151A5D8V7 595 aa11.79□□□□□ -0.52
FN1-226ENST00000496542 OR6C70A6NIJ9 312 aa11.79□□□□□ -0.52
FN1-226ENST00000496542 CD8B2A6NJW9 211 aa11.79□□□□□ -0.52
FN1-226ENST00000496542 EEF1E1-BLOC1S5C9J1V9 151 aa11.79□□□□□ -0.52
FN1-226ENST00000496542 H0Y3Z8 333 aa11.79□□□□□ -0.52
FN1-226ENST00000496542 KIF2AO00139 706 aaPredicted RBP11.79□□□□□ -0.52
FN1-226ENST00000496542 EEF1E1O43324 174 aaKnown RBP11.79□□□□□ -0.52
FN1-226ENST00000496542 ERN1O75460 977 aaKnown RBP11.79□□□□□ -0.52
FN1-226ENST00000496542 CTAG2O75638 210 aa11.79□□□□□ -0.52
FN1-226ENST00000496542 BCAS2O75934 225 aaPredicted RBP11.79□□□□□ -0.52
FN1-226ENST00000496542 ACTL6AO96019 429 aa11.79□□□□□ -0.52
FN1-226ENST00000496542 GSTA1P08263 222 aa11.79□□□□□ -0.52
FN1-226ENST00000496542 ANXA4P09525 319 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms