RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 KIF17Q9P2E2 1029 aa12.77□□□□□ -0.36
SPTBN1-205ENST00000496323 ACAD8Q9UKU7 415 aa12.77□□□□□ -0.36
SPTBN1-205ENST00000496323 VPS13AQ96RL7 3174 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 A8MU76 341 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 TMEM150CB9EJG8 249 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 BCKDKO14874 412 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 HYAL3O43820 417 aaPredicted RBP12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 CTNSO60931 367 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 OR2B3O76000 313 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 SLITRK5O94991 958 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 GADD45GO95257 159 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 CBX7O95931 251 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 IFI6P09912 130 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 MAP3K8P41279 467 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 RPL5P46777 297 aaKnown RBP12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 EMP3P54852 163 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 IGLV3-21P80748 117 aaPredicted RBP12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 CD47Q08722 323 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 FOXD4Q12950 439 aaPredicted RBP12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 SLC13A2Q13183 592 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 DEF8Q6ZN54 512 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 TMPRSS9Q7Z410 1059 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 VRK2Q86Y07 508 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 ZNF595Q8IYB9 648 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 OR9Q2Q8NGE9 314 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 OR1L3Q8NH93 324 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 DHRS1Q96LJ7 313 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 NIPSNAP1Q9BPW8 284 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 CXorf21Q9HAI6 301 aa12.77□□□□□ -0.37
SPTBN1-205ENST00000496323 THADAQ6YHU6 1953 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 TRBV4-1A0A0J9YWV2 114 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 H0YIG0 161 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 PABPC4LP0CB38 370 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 GCGRP47871 477 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 AVPR1BP47901 424 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 MAP4K2Q12851 820 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 RAPSNQ13702 412 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 NPTX1Q15818 432 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 MEP1AQ16819 746 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 ARHGAP11BQ3KRB8 267 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 CCNJQ5T5M9 372 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 TYW3Q6IPR3 259 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 ZNF770Q6IQ21 691 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 GUSBP11Q6P575 273 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 PRSS42Q7Z5A4 293 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 APLFQ8IW19 511 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 CHDHQ8NE62 594 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 OR6T1Q8NGN1 323 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 OR51Q1Q8NH59 317 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 OR4C6Q8NH72 309 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 PHF10Q8WUB8 498 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 ZC3H10Q96K80 434 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 ALPK1Q96QP1 1244 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 DUSP23Q9BVJ7 150 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 PINK1Q9BXM7 581 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 PIGUQ9H490 435 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 CUTCQ9NTM9 273 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 CALML5Q9NZT1 146 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 MKLN1Q9UL63 735 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 NDRG4Q9ULP0 352 aaKnown RBP12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 A4GNTQ9UNA3 340 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 GPR55Q9Y2T6 319 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 MAU2Q9Y6X3 613 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 TRIM64CA6NLI5 447 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 PATE3B3GLJ2 98 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 HRKO00198 91 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 SIGLEC6O43699 453 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 OR10H2O60403 315 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 UGT2B11O75310 529 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 AGR2O95994 175 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 CFIP05156 583 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 IL7RP16871 459 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 MAOAP21397 527 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 ARL4DP49703 201 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 NPRL3Q12980 569 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 IL18R1Q13478 541 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 PIN1Q13526 163 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 SEC23BQ15437 767 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 NADK2Q4G0N4 442 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 ZNF311Q5JNZ3 666 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 COLEC12Q5KU26 742 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 PERM1Q5SV97 790 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 ZNF574Q6ZN55 896 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 CCDC71Q8IV32 467 aaPredicted RBP12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 VWA5B2Q8N398 1253 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 CDRT4Q8N9R6 151 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 OR52R1Q8NGF1 315 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 OR2I1PQ8NGU4 316 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 ADAMTS18Q8TE60 1221 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 FBLIM1Q8WUP2 373 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 SDF2Q99470 211 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 PSD2Q9BQI7 771 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 GABARAPL3Q9BY60 117 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 ALOXE3Q9BYJ1 711 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 ING2Q9H160 280 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 PRTFDC1Q9NRG1 225 aa12.76□□□□□ -0.37
SPTBN1-205ENST00000496323 ZNF749O43361 778 aa12.75□□□□□ -0.37
SPTBN1-205ENST00000496323 ALPPP05187 535 aa12.75□□□□□ -0.37
SPTBN1-205ENST00000496323 ANXA8P13928 327 aa12.75□□□□□ -0.37
SPTBN1-205ENST00000496323 CBLP22681 906 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms