RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 AGFG1P52594 562 aaKnown RBP8.77□□□□□ -1.01
MSH5-218ENST00000494646 NAGLUP54802 743 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 PKNOX1P55347 436 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 PLCXD2Q0VAA5 305 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 ZNF628Q5EBL2 1059 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 TIGD3Q6B0B8 471 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 ANGPTL8Q6UXH0 198 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 SH2D5Q6ZV89 423 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 SEM1Q6ZVN7 128 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 LCA5Q86VQ0 697 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 DMRTC2Q8IXT2 367 aaPredicted RBP8.77□□□□□ -1.01
MSH5-218ENST00000494646 GBP7Q8N8V2 638 aaPredicted RBP8.77□□□□□ -1.01
MSH5-218ENST00000494646 ACBD4Q8NC06 268 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 TNIP2Q8NFZ5 429 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 OR9A2Q8NGT5 310 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 HGDQ93099 445 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 SECISBP2Q96T21 854 aaKnown RBP8.77□□□□□ -1.01
MSH5-218ENST00000494646 UBQLN3Q9H347 655 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 MCCC2Q9HCC0 563 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 GALNT9Q9HCQ5 603 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 KLRF1Q9NZS2 232 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 PRODH2Q9UF12 536 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 FETUBQ9UGM5 382 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 GRID1Q9ULK0 1009 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 MAPRE3Q9UPY8 281 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 NUP214P35658 2090 aaPredicted RBP8.77□□□□□ -1.01
MSH5-218ENST00000494646 CCDC168Q8NDH2 2452 aa8.77□□□□□ -1.01
MSH5-218ENST00000494646 SPG11Q96JI7 2443 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 TLDC2A0PJX2 215 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 CCDC151A5D8V7 595 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 AHRRA9YTQ3 701 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 PLIN3O60664 434 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 GLRA3O75311 464 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 CRCPO75575 148 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 PROCP04070 461 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 JUNP05412 331 aaKnown RBP8.76□□□□□ -1.01
MSH5-218ENST00000494646 ENO1P06733 434 aaKnown RBP8.76□□□□□ -1.01
MSH5-218ENST00000494646 NAGAP17050 411 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 BMP7P18075 431 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 DRD5P21918 477 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 PTPN6P29350 595 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 CCT5P48643 541 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 DLX5P56178 289 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 DCAF7P61962 342 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 CRYZQ08257 329 aaKnown RBP8.76□□□□□ -1.01
MSH5-218ENST00000494646 HEPACAMQ14CZ8 416 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 IMPG1Q17R60 797 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 SPIN4Q56A73 249 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 CFAP157Q5JU67 520 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 SH2D4BQ5SQS7 431 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 VASNQ6EMK4 673 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 OR5M10Q6IEU7 315 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 SLC30A6Q6NXT4 461 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 ZYG11AQ6WRX3 759 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 C4orf33Q8N1A6 199 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 FAM83FQ8NEG4 500 aaPredicted RBP8.76□□□□□ -1.01
MSH5-218ENST00000494646 C17orf47Q8NEP4 570 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 OR4N2Q8NGD1 307 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 EPS8L3Q8TE67 593 aaKnown RBP8.76□□□□□ -1.01
MSH5-218ENST00000494646 ABTB1Q969K4 478 aaPredicted RBP8.76□□□□□ -1.01
MSH5-218ENST00000494646 C14orf79Q96F83 325 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 WDYHV1Q96HA8 205 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 TMEM41AQ96HV5 264 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 BBS4Q96RK4 519 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 TRIB1Q96RU8 372 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 ADOQ96SZ5 270 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 TREX2Q9BQ50 279 aaPredicted RBP8.76□□□□□ -1.01
MSH5-218ENST00000494646 ZNF559Q9BR84 538 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 UGT2B28Q9BY64 529 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 TNFRSF12AQ9NP84 129 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 SLC35C2Q9NQQ7 365 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 GIMAP4Q9NUV9 329 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 GPR55Q9Y2T6 319 aaPredicted RBP8.76□□□□□ -1.01
MSH5-218ENST00000494646 C15orf41Q9Y2V0 281 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 FIS1Q9Y3D6 152 aa8.76□□□□□ -1.01
MSH5-218ENST00000494646 POLR3HQ9Y535 204 aaPredicted RBP8.76□□□□□ -1.01
MSH5-218ENST00000494646 MED13LQ71F56 2210 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 SERTM1A2A2V5 107 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 COPEO14579 308 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 ACOX3O15254 700 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 ERN1O75460 977 aaKnown RBP8.75□□□□□ -1.01
MSH5-218ENST00000494646 BCAS2O75934 225 aaPredicted RBP8.75□□□□□ -1.01
MSH5-218ENST00000494646 EPPINO95925 133 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 CT45A8P0DMV1 189 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 CT45A9P0DMV2 189 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 CPA3P15088 417 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 IGFBP2P18065 325 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 KRT4P19013 534 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 CAPN3P20807 821 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 BMP5P22003 454 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 TCEA1P23193 301 aaKnown RBP8.75□□□□□ -1.01
MSH5-218ENST00000494646 UQCRC1P31930 480 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 MPIP34949 423 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 CRHR1P34998 444 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 STARP49675 285 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 CORO7P57737 925 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 SRYQ05066 204 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 MYBPHQ13203 477 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 CCDC153Q494R4 210 aa8.75□□□□□ -1.01
MSH5-218ENST00000494646 CT45A2Q5DJT8 189 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms