RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 WASF3Q9UPY6 502 aa13.1□□□□□ -0.31
UBE3C-207ENST00000494532 MRPS18BQ9Y676 258 aaKnown RBP13.1□□□□□ -0.31
UBE3C-207ENST00000494532 IGHV1-45A0A0A0MS14 117 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 TMEM247A6NEH6 219 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 OR6C76A6NM76 312 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 ASNA1O43681 348 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 SLC28A2O43868 658 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 GMNNO75496 209 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 AGR2O95994 175 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 LIFP15018 202 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 MAN2A2P49641 1150 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 CDK6Q00534 326 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 IL10RAQ13651 578 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 TRIM25Q14258 630 aaKnown RBP13.09□□□□□ -0.31
UBE3C-207ENST00000494532 ADRM1Q16186 407 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 DUSP5Q16690 384 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 ZNF630Q2M218 657 aaPredicted RBP13.09□□□□□ -0.31
UBE3C-207ENST00000494532 C1orf146Q5VVC0 180 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 KIRREL2Q6UWL6 708 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 SLC29A4Q7RTT9 530 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 C16orf62Q7Z3J2 963 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 SLC44A2Q8IWA5 706 aaPredicted RBP13.09□□□□□ -0.31
UBE3C-207ENST00000494532 SLC16A11Q8NCK7 471 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 FAM13CQ8NE31 585 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 OR11G2Q8NGC1 345 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 NFKBIDQ8NI38 313 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 CDS1Q92903 461 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 MAL2Q969L2 176 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 ASB9Q96DX5 294 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 VSTM2LQ96N03 204 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 STACQ99469 402 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 LMF2Q9BU23 707 aaKnown RBP13.09□□□□□ -0.31
UBE3C-207ENST00000494532 EFHD1Q9BUP0 239 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 ITPAQ9BY32 194 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 PCDHAC1Q9H158 963 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 PIGUQ9H490 435 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 TMEM38AQ9H6F2 299 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 A4GALTQ9NPC4 353 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 EXD2Q9NVH0 621 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 EGFL7Q9UHF1 273 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 PPIEQ9UNP9 301 aaKnown RBP13.09□□□□□ -0.31
UBE3C-207ENST00000494532 POMPQ9Y244 141 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 ANGPT4Q9Y264 503 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 DTX4Q9Y2E6 619 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 MSRB2Q9Y3D2 182 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 SNX13Q9Y5W8 968 aa13.09□□□□□ -0.31
UBE3C-207ENST00000494532 NSG1A0A0A6YYJ2 146 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 A0A1W2PQ72 361 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 TTC36A6NLP5 189 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 C5orf58C9J3I9 102 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 CXCR6O00574 342 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 ARPC2O15144 300 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 CREG1O75629 220 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 SOX30O94993 753 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 NCK1P16333 377 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 GGT1P19440 569 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 GABRA3P34903 492 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 PCGF2P35227 344 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 GPR143P51810 404 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 RBBP4Q09028 425 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 TRAP1Q12931 704 aaKnown RBP13.08□□□□□ -0.32
UBE3C-207ENST00000494532 SCARB2Q14108 478 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 MYBPC3Q14896 1274 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 BTBD16Q32M84 506 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 EXOSC6Q5RKV6 272 aaKnown RBP13.08□□□□□ -0.32
UBE3C-207ENST00000494532 HLA-DQA1Q5Y7H0 255 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 NDUFAF7Q7L592 441 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 MRGPREQ86SM8 312 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 VASH2Q86V25 355 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 DHFR2Q86XF0 187 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 PTRH1Q86Y79 214 aaKnown RBP13.08□□□□□ -0.32
UBE3C-207ENST00000494532 SLC30A8Q8IWU4 369 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 COX18Q8N8Q8 333 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 GPR151Q8TDV0 419 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 FIG4Q92562 907 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 HOXB13Q92826 284 aaPredicted RBP13.08□□□□□ -0.32
UBE3C-207ENST00000494532 NACC2Q96BF6 587 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 SLC35A4Q96G79 324 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 GAL3ST4Q96RP7 486 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 SEMA4CQ9C0C4 833 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 DUSP22Q9NRW4 184 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 GIN1Q9NXP7 522 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 MAGEL2Q9UJ55 1249 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 PCDHGB3Q9Y5G1 929 aa13.08□□□□□ -0.32
UBE3C-207ENST00000494532 TRBV11-1A0A0K0K1C0 115 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 A8MVJ9 347 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 PEX12O00623 359 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 NKX2-2O95096 273 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 HPP00738 406 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 BCHEP06276 602 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 NR2F1P10589 423 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 MAP3K8P41279 467 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 CLCN2P51788 898 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 CORO7P57737 925 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 POU6F2P78424 691 aaPredicted RBP13.07□□□□□ -0.32
UBE3C-207ENST00000494532 MS4A2Q01362 244 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 FLOT2Q14254 428 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 GNA13Q14344 377 aa13.07□□□□□ -0.32
UBE3C-207ENST00000494532 EBPQ15125 230 aaKnown RBP13.07□□□□□ -0.32
UBE3C-207ENST00000494532 EXT1Q16394 746 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms