RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 PDE7BQ9NP56 450 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 SOHLH2Q9NX45 425 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 CALML5Q9NZT1 146 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 AASSQ9UDR5 926 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 POFUT2Q9Y2G5 429 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 CEPT1Q9Y6K0 416 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 UNC13CQ8NB66 2214 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 RP1P56715 2156 aa15.45■□□□□ 0.06
ATG4B-225ENST00000494465 HYKKA2RU49 373 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 SLC1A7O00341 560 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 NSA2O95478 260 aaKnown RBP15.44■□□□□ 0.06
ATG4B-225ENST00000494465 ZBTB11O95625 1053 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-225ENST00000494465 HTR1AP08908 422 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 PAX7P23759 505 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 ELAVL4P26378 380 aaKnown RBP15.44■□□□□ 0.06
ATG4B-225ENST00000494465 NPTX1Q15818 432 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 NDUFA9Q16795 377 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 INAVAQ3KP66 663 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 MLIPQ5VWP3 458 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 VRK2Q86Y07 508 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 ZNF566Q969W8 418 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 KLHL3Q9UH77 587 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 TMEM184BQ9Y519 407 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-225ENST00000494465 PCDHGA6Q9Y5G7 932 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 FITM1A5D6W6 292 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 H3BMH7 237 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 H3BSA7 217 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 SLITRK5O94991 958 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 AGR2O95994 175 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 GASTP01350 101 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 SLC35E2P0CK97 266 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 MYF5P13349 255 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 MAP3K8P41279 467 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 PPM1FP49593 454 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-225ENST00000494465 MAT1AQ00266 395 aaKnown RBP15.44■□□□□ 0.06
ATG4B-225ENST00000494465 FOXD4Q12950 439 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-225ENST00000494465 PIN1Q13526 163 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-225ENST00000494465 ARHGAP11BQ3KRB8 267 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 AQP11Q8NBQ7 271 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 UBE2FQ969M7 185 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 ELF4Q99607 663 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-225ENST00000494465 APOL4Q9BPW4 351 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 SPRTNQ9H040 489 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-225ENST00000494465 ADAP2Q9NPF8 381 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 PAK1IP1Q9NWT1 392 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-225ENST00000494465 CLDN16Q9Y5I7 305 aa15.44■□□□□ 0.06
ATG4B-225ENST00000494465 SYT5O00445 386 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 HRO43593 1189 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 ALPPP05187 535 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 H1F0P07305 194 aaKnown RBP15.43■□□□□ 0.06
ATG4B-225ENST00000494465 RNH1P13489 461 aaKnown RBP15.43■□□□□ 0.06
ATG4B-225ENST00000494465 GLB1P16278 677 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 GABARAPL2P60520 117 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 ZXDAP98168 799 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 KCNAB1Q14722 419 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 MAD2L1BPQ15013 274 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-225ENST00000494465 EXOSC7Q15024 291 aaKnown RBP15.43■□□□□ 0.06
ATG4B-225ENST00000494465 SYT16Q17RD7 645 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 ZNF311Q5JNZ3 666 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 GARNL3Q5VVW2 1013 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 LYSMD4Q5XG99 296 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 TYW3Q6IPR3 259 aaKnown RBP15.43■□□□□ 0.06
ATG4B-225ENST00000494465 B3GNT8Q7Z7M8 397 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 PEX11GQ96HA9 241 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 PIGUQ9H490 435 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 PRMT8Q9NR22 394 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-225ENST00000494465 SLC9A8Q9Y2E8 581 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 GPR55Q9Y2T6 319 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-225ENST00000494465 CCDC159P0C7I6 412 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 POU2F1P14859 743 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 EEF1B2P24534 225 aaKnown RBP15.43■□□□□ 0.06
ATG4B-225ENST00000494465 DUSP8Q13202 625 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 TOP3AQ13472 1001 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-225ENST00000494465 NR1D2Q14995 579 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 PRPF38BQ5VTL8 546 aaKnown RBP15.43■□□□□ 0.06
ATG4B-225ENST00000494465 PMS2CLQ68D20 193 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 KCTD8Q6ZWB6 473 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 TAGAPQ8N103 731 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 PARP8Q8N3A8 854 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 GTPBP3Q969Y2 492 aaKnown RBP15.43■□□□□ 0.06
ATG4B-225ENST00000494465 SDF2Q99470 211 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 ARHGDIGQ99819 225 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 MAN2C1Q9NTJ4 1040 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 TMEM9Q9P0T7 183 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 MKLN1Q9UL63 735 aa15.43■□□□□ 0.06
ATG4B-225ENST00000494465 XPNPEP2O43895 674 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 PCDHGA12O60330 932 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 CPNE6O95741 557 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 ANGPTL1O95841 491 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 CBX7O95931 251 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 S1PR1P21453 382 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 CSF2RBP32927 897 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 DHPSP49366 369 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-225ENST00000494465 PMS2P3Q13401 168 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 FGD3Q5JSP0 725 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 TCTE1Q5JU00 501 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 NIPAL1Q6NVV3 410 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 KLHL17Q6TDP4 642 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 WDR5BQ86VZ2 330 aa15.42■□□□□ 0.06
ATG4B-225ENST00000494465 SLC7A13Q8TCU3 470 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms