RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 MYH1P12882 1939 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 LOC100509620A0A075B734 347 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 LRRTM2O43300 516 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 CD97P48960 835 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 GTDC1Q4AE62 458 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 LARP4Q71RC2 724 aaKnown RBP eCLIP18.2■□□□□ 0.5
COL27A1-207ENST00000494090 TEX26Q8N6G2 289 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 PAPD5Q8NDF8 572 aaKnown RBP18.2■□□□□ 0.5
COL27A1-207ENST00000494090 IL26Q9NPH9 171 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 NANSQ9NR45 359 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 DRGXA6NNA5 263 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 IL7P13232 177 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 AK4P27144 223 aaPredicted RBP18.2■□□□□ 0.5
COL27A1-207ENST00000494090 KCTD9Q7L273 389 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 GPR137CQ8N3F9 429 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 HOXB13Q92826 284 aaPredicted RBP18.2■□□□□ 0.5
COL27A1-207ENST00000494090 SLC30A3Q99726 388 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 DRD1P21728 446 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 HNRNPA2B1P22626 353 aaKnown RBP18.2■□□□□ 0.5
COL27A1-207ENST00000494090 LRP8Q14114 963 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 VEZF1Q14119 521 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 GK3PQ14409 553 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 MLC1Q15049 377 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 SF3B4Q15427 424 aaKnown RBP eCLIP18.2■□□□□ 0.51e-6■■■□□ 18.7
COL27A1-207ENST00000494090 TMEM69Q5SWH9 247 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 GALNT10Q86SR1 603 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 SLC15A4Q8N697 577 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 OR2T4Q8NH00 348 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 MAL2Q969L2 176 aa18.2■□□□□ 0.5
COL27A1-207ENST00000494090 CNN2Q99439 309 aaKnown RBP18.2■□□□□ 0.5
COL27A1-207ENST00000494090 PRAMEF2O60811 474 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 RFPL2O75678 378 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 GNAO1P09471 354 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 THBS2P35442 1172 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 GGT2P36268 569 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 MTNR1AP48039 350 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 CRYZQ08257 329 aaKnown RBP18.19■□□□□ 0.5
COL27A1-207ENST00000494090 CDK5R2Q13319 367 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 TLDC1Q6P9B6 456 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 OR8K3Q8NH51 312 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 ZNF597Q96LX8 424 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 MTHFD2LQ9H903 347 aaPredicted RBP18.19■□□□□ 0.5
COL27A1-207ENST00000494090 KCNK12Q9HB15 430 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 FTSJ1Q9UET6 329 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 CD8B2A6NJW9 211 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 ARNTLO00327 626 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 CDC40O60508 579 aaKnown RBP eCLIP18.19■□□□□ 0.53e-6■■■□□ 16.1
COL27A1-207ENST00000494090 JRKO75564 520 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 EDN1P05305 212 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 CD8BP10966 210 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 S100A2P29034 98 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 CNR2P34972 360 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 KIAA0895LQ68EN5 471 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 UGT2A3Q6UWM9 527 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 LAS2Q8IYD9 372 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 ZDHHC1Q8WTX9 485 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 TM9SF4Q92544 642 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 AGPAT4Q9NRZ5 378 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 NAA10P41227 235 aaPredicted RBP18.19■□□□□ 0.5
COL27A1-207ENST00000494090 BMXP51813 675 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 SELENOWP63302 87 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 ARSKQ6UWY0 536 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 TTLL10Q6ZVT0 673 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 HMGN2P46Q86SG4 172 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 KLHDC8AQ8IYD2 350 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 ADGRG5Q8IZF4 528 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 MS4A15Q8N5U1 240 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 OR4K5Q8NGD3 323 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 OR8S1Q8NH09 359 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 SORCS1Q8WY21 1168 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 UTP4Q969X6 686 aaKnown RBP18.19■□□□□ 0.5
COL27A1-207ENST00000494090 FN3KQ9H479 309 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 ERVK13-1Q9NX77 482 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 POLR1CO15160 346 aaPredicted RBP18.19■□□□□ 0.5
COL27A1-207ENST00000494090 RP2O75695 350 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 SLC16A8O95907 504 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 THEGLP0DJG4 465 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 AFF1P51825 1210 aaKnown RBP18.19■□□□□ 0.5
COL27A1-207ENST00000494090 ARL6IP1Q15041 203 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 NKAPLQ5M9Q1 402 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 NAGSQ8N159 534 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 NAXEQ8NCW5 288 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 NELFAQ9H3P2 528 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 TIMP1P01033 207 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 GNRHRP30968 328 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 CPZQ66K79 652 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 ABHD11Q8NFV4 315 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 STOML3Q8TAV4 291 aa18.19■□□□□ 0.5
COL27A1-207ENST00000494090 DCAF13Q9NV06 445 aaKnown RBP18.19■□□□□ 0.5
COL27A1-207ENST00000494090 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.18■□□□□ 0.5
COL27A1-207ENST00000494090 H3BMQ9 156 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 H7C417 338 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 SLC14A2Q15849 920 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 TFAP2CQ92754 450 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 COG8Q96MW5 612 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 MYH15Q9Y2K3 1946 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 PTTG1O95997 202 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 GTF2F2P13984 249 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 FXYD6P3P58550 94 aa18.18■□□□□ 0.5
COL27A1-207ENST00000494090 DSC1Q08554 894 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms