RNA–Protein interactions for RNA: ENST00000494080.5

CCDC88B-209, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 4,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-209ENST00000494080 OR6C74A6NCV1 312 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 TMEM150CB9EJG8 249 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 C1QAP02745 245 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 MTHFD2P13995 350 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 C5AR1P21730 350 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 DRD5P21918 477 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 IL32P24001 234 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 ITGB7P26010 798 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 SNTB2Q13425 540 aaKnown RBP15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 PTGES3Q15185 160 aaKnown RBP15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 EIPR1Q53HC9 387 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 SHFQ7M4L6 423 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 KLHDC7BQ96G42 594 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 COQ10AQ96MF6 247 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 MACROD1Q9BQ69 325 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 ZBP1Q9H171 429 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 IL21RQ9HBE5 538 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 TEX13CA0A0J9YWL9 993 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 HMGN1P05114 100 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 SLC36A4Q6YBV0 504 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 HSDL2Q6YN16 418 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 METTL27Q8N6F8 245 aaPredicted RBP15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 OR51G2Q8NGK0 314 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 LMX1AQ8TE12 382 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 METTL21AQ8WXB1 218 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 SLC7A6Q92536 515 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 TRIM36Q9NQ86 728 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 NPAP1Q9NZP6 1156 aa15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 EXOSC1Q9Y3B2 195 aaKnown RBP15.46■□□□□ 0.07
CCDC88B-209ENST00000494080 BRWD3Q6RI45 1802 aa15.46■□□□□ 0.06
CCDC88B-209ENST00000494080 B8ZZF3 427 aa15.46■□□□□ 0.06
CCDC88B-209ENST00000494080 J3QLW9 94 aa15.46■□□□□ 0.06
CCDC88B-209ENST00000494080 ZNF19P17023 458 aa15.46■□□□□ 0.06
CCDC88B-209ENST00000494080 VSX2P58304 361 aaPredicted RBP15.46■□□□□ 0.06
CCDC88B-209ENST00000494080 FAPQ12884 760 aa15.46■□□□□ 0.06
CCDC88B-209ENST00000494080 GALEQ14376 348 aa15.46■□□□□ 0.06
CCDC88B-209ENST00000494080 PIAS3Q9Y6X2 628 aa15.46■□□□□ 0.06
CCDC88B-209ENST00000494080 ARFGEF1Q9Y6D6 1849 aa15.46■□□□□ 0.06
CCDC88B-209ENST00000494080 OR2A25A4D2G3 310 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 ARHGAP33O14559 1287 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 PTGER1P34995 402 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 IRS1P35568 1242 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 RPL35P42766 123 aaKnown RBP15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 MICAQ29983 383 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 PXDC1Q5TGL8 231 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 SLC30A6Q6NXT4 461 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 JAZF1Q86VZ6 243 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 LILRA3Q8N6C8 439 aaPredicted RBP15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 IQCF1Q8N6M8 205 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 PJA1Q8NG27 643 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 FATE1Q969F0 183 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 PPP1R14AQ96A00 147 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 CIDECQ96AQ7 238 aaPredicted RBP15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 H2AFB2P0C5Z0 115 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 TGM1P22735 817 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 AHCYP23526 432 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 ACADLP28330 430 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 SSTR2P30874 369 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 UGT2B10P36537 528 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 RBBP4Q09028 425 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 ST3GAL3Q11203 375 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 CTF1Q16619 201 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 SMUG1Q53HV7 270 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 FAM219BQ5XKK7 198 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 ZNF761Q86XN6 746 aaPredicted RBP15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 OR4K14Q8NGD5 310 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 SECISBP2Q96T21 854 aaKnown RBP15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 MBOAT4Q96T53 435 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 ARL6Q9H0F7 186 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 OR7A17O14581 309 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 CAMK1Q14012 370 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 TMEM107Q6UX40 140 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 GPR174Q9BXC1 333 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 POLE3Q9NRF9 147 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 PSORS1C1Q9UIG5 152 aa15.45■□□□□ 0.06
CCDC88B-209ENST00000494080 CPED1A4D0V7 1026 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 PCDHGA12O60330 932 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 ZDHHC11BP0C7U3 371 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 RHCEP18577 417 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 HK1P19367 917 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 LHCGRP22888 699 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 PSMA3P25788 255 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 FLYWCH1Q4VC44 716 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 CDKL4Q5MAI5 379 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 KHDRBS2Q5VWX1 349 aaKnown RBP15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 FAM205BPQ63HN1 556 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 VRK3Q8IV63 474 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 RIT1Q92963 219 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 RNF31Q96EP0 1072 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 OR4K3Q96R72 315 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 OR5M11Q96RB7 305 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 MNTQ99583 582 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 MCHR1Q99705 422 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 LRRN3E7EW58 273 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 XKRYO14609 159 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 MYOGP15173 224 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 F8A1P23610 371 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 HK3P52790 923 aa15.44■□□□□ 0.06
CCDC88B-209ENST00000494080 ESCO2Q56NI9 601 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms